Microarray Probes on PGSC0003DMT400060674
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_16400_PI426222305 |
JHI_St_60k_v1 |
GATTGAAGATGGATCGGATAAAGGGAAGGAATTTGCAGTGATGACTCTTTTGCAGCTATG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400060674
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400060674 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G16490.1 |
+2 |
0.0 |
540 |
306/443 (69%) |
ARM repeat superfamily protein | chr4:9293891-9295530 REVERSE LENGTH=472 |
Transcript Sequence (2260 bp)
>PGSC0003DMT400060674 2260 pgsc_dm_v3.4
TATAAATCCACCATTTTCATCACTCATTCGAGTTCTCTCTCAGTTCCACTTTCTTCTCAA
ATTCCGCCATGAAAATTTCTTAAACCAACATAAAAAAACACCCTTTTCACCAAATCTAAC
AATTCTTCAAACACATTTGAAAACTCCATCGTTCTTGCTCTGTTTCTGAATTTCATTTCT
TCCCTTTTTATTCACAAATTCCGCCATGAAAATTTCTTAAAACCCATTAAAAGAGCCACC
CTTTTCTCCAAATCTGAGATTTCTGAACTCACATTTGACTAATTGAAACTCTGTTTTTGC
AAAGTTTCCAAATATGGTTTCGCTAGAAAATTCTCATTCTCATGTTTCTTCTACTACCCA
TTACTCCCAAACACGGCCTTATTACTATACTCCACCGCCGTCCTCCGCCAAAGTTCACCG
ACGTTCAATCGGCCGGTCCATGCGCACTATCCGGTCCAATTTGTACCAAACCGACTACGA
AAACTCCGGTCCGGTTTATGAGAACCTTACAGATTCCGTCGTTGATTTTCGCCTTACTGA
GCTAGCGAAGAAGCCGCCGGTTGATAAATCTTCTTTTTCCGATGTGGAATTTCTGGACAT
TTCCCATACTTTCAGTGATTTCTCGGCGTATAGCAGTGATATTTCCGGCGAGTTGGAACG
TTTAGCTTACATCCCAAATTCGGATCCGAATCAGAGTTCCGTTAGTGAACCCGAACCGGA
ACCGGAACCTTGTGTAGGGTTTCTGCAGCGGGAGACATTTTCGACAGAGATAATGGAAAG
CATTGAGCCGGAGGATCTTCAGCCGACGGTGAAACTCTGCGTCGACAGTTTACAGTCACC
GTCGGTTGCCGTGAAAAGATCGGCGGCGGAGAAATTGAGGTTTTTAGCTAAAAATCGAGC
TGATAATCGTGCTTTAATCGGAGAGTCTGGTGCTATTCCGGCATTGTTACCACTTCTCCG
GTGCTCCGATCCACGGACTCAGGAACACGCTGTAACAGCTCTTCTCAATCTGTCGCTTCA
CGAACCGAATAAAACCTTAATTACAAACTCCGGGGCGATAAAATCTTTGATTTACGTGTT
GAAAACGGGCACTGAAACTTCGAAACAGAATGCAGCTTGTGGGTTGCTAAGCTTAGCTTT
GATAGATGAGAATAAGTTATCCATTGGTGCTTGTGGTGCTATTGCCCCATTAGTGGCACT
GTTAATAAACGGGACGAATCGGGGAAAGAAGGATGCTCTAACGACGTTGTATAAGCTATG
CACGGTGAGATTGAATAAAGAACGGGCAGTGAGTGCTGGTGCTGTGAAACCATTGGTGGG
GTTAGTGTGTGAGGAGGGAACAGGGTTAGCTGAGAAGGCTATGGTGGTGTTAAGTAGCTT
AACGGGTATCGAGATGGGGCAAGAAAGTATAGTTGAGGAAGGAGGAATTGCTGCACTTGT
GGAAGTGATTGAAGATGGATCGGATAAAGGGAAGGAATTTGCAGTGATGACTCTTTTGCA
GCTATGTGTTGATAGTGTAAGGAATAGAGGACTTCTTGTTAGGGAAGGAGGAATCCCTCC
TCTCGTCGCCTTGTCGCAGACCGGAACTGCTAAAGCTAAGCACAAGGCAGAAACATTACT
GACATACTTGAGGGAATCAAGACAAGAAGCTTCTACTTCAACTCCTTAGCGAGGTAGCTT
AGATGGTCTTCTACATTTGAGTATTTTCTGTTTATAGGAAGTGATTTGAAGAGTTTGTAC
AGAGTGGTTTATAAATTTAAAAGTTCATAACATATGTCAAGGTAATCAAGAAAATAAATA
TCAAGTTAGTTTAAGGAAACTGACCTATTTAGGTAAATTTTTAACCAAGTTATTACATAG
GAGCTGGCAAGGGTGGTGGGAAGGGTTCTCATGTCCCTTTTGAATTATTATCTGTGAGGT
TGTTTGGTAAGAATTTGATAATGATCCCTTAGTTTTGTTTGGGTGGTCCTAATTCTTCTG
AAAGAGTTACTAATTTTCTGATTCTTTAGTGTGTAAAAAAGCTACTATTTCAGTATGCTT
TAGTCTTTTTTGGTTCTTGAACAATATGTCCAGTAATGAGATATTTTCTTGATTTTCTAT
GACTGAAATATGTCAAAGCTCAATTTTTTTCTTCAAGGTTGGGTTGTTGGCATTTTTACA
GCTATTAAATTTGTGTCTCCATCTATACAACTAGAAGAGTGTCAGATGTTTATATTTTCC
TTTGGTGTGAATACAGAGGGTATAGCAGCCCCACCTCTCC
