Microarray Probes on PGSC0003DMT400060477
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_14109_PI426222305 |
JHI_St_60k_v1 |
TTCGGGTCGTATGTTTCATACTTAACGGGTCACGTTTTCATATGTAATATTCATCCATCA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400060477
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400060477 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G55390.1 |
+3 |
1e-65 |
207 |
123/203 (61%) |
Uncharacterised protein family (UPF0497) | chr3:20534785-20535620 FORWARD LENGTH=194 |
Transcript Sequence (908 bp)
>PGSC0003DMT400060477 908 pgsc_dm_v3.4
TCATGAGAATCATGCCATGTCTCGTGACTTCAAATCCCCAAACAGAAAAAAAAACTTTTC
ACACATGAAATCAAATTTTCCAGAAAATTAATAAATTCACCCAACTTTAATTTCTCTATG
AATTTCTCCATCTCCGTCTGACTTTCTCGCCGGAAAAAATGATGAGGTCGCCGCAGGAAC
CGAACCGGAACGGCGGTATTAGAACTCCGTCTCCCCGGCCGAGAAATCAATCTCAGTTTC
ACTCAACCGTTTCCGTGCAAAAAAACCAGCGGTTCAATATTTTGATACTCATTTTCCGGT
TCGCCGCCTTCTGCTTCTCACTCGCCTCTGCAATTTTCATGTTCGCTAACTATCACGGCG
ATGGCTCCGATTCCGATACCGATTCTCTTCGGTGGTACCACTTCGATGCGTTCAGATTTG
TGGCAATTGCAGCTGGGATTGTAGCATTGTATTCACTATTCGAAATTGGAGCTTCGGTTT
GGGAAATATCAAGAGGCACCACTGTTCTTCCTGAAGTTGTACAAGTTTGGTTCGATTTCA
GCCACGATCAGGTTTTTGCATACATGTTGTTGTCGGCAGATTCAGCGGGAACGGCGTTAG
CTCGGACGTTAAGGGATCGGGACACGTGTACGGCTAATAATGCATTTTGTGTTCAATCAG
ATATATCCGTCGCCTTAGGATTCGCCGGGTTTATGTTCTTGAGTTTTTCTTCTTTATTAT
CGGGTTTTCGGGTCGTATGTTTCATACTTAACGGGTCACGTTTTCATATGTAATATTCAT
CCATCATTATGTTGTAATCTTTACTCATAAATCTTAATGAAGGTAAATTTTGATTTTAGT
CTCGTATCTGTATCTGACTAAACATATTGAACCTTCAAAATATGTTAATGCAATTCATAT
TTTTTTAG
