Microarray Probes on PGSC0003DMT400059948
Probe ID | Chip | Probe Sequence |
---|
CUST_14276_PI426222305 |
JHI_St_60k_v1 |
AAACAATCACAACCATCATCACCACCAATATCTTTCTAGTTCTTTGTCTTTTCACTCATG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400059948
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400059948 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT5G53590.1 |
+1 |
1e-16 |
74 |
32/72 (44%) |
SAUR-like auxin-responsive protein family | chr5:21772107-21772535 FORWARD LENGTH=142 |
Transcript Sequence (577 bp)
>PGSC0003DMT400059948 577 pgsc_dm_v3.4
CACATATTCACCACTTATTAGACCTCATCACTTGTTCACAACACACATATTCTCCCTCTC
TTATCTTTTCTATTGCGATTAATTCTGCGATCAAACTTTTATTAATTTATATATTAATAT
CAAACGATAAAAATCATGAAGGTGAAGAAAGGATGGCTAGCAATTCAAGTAGGACTAGAA
GAAGAAGATGGTGGTATTCAAAAATTTGTTATCCCAATTTCATATCTATATCATCCTCTT
CTACAAAAGCTTCTTGATAAAGCTCATGATGTCTATGGCTACCATGTTGATGGACCATTA
AAGCTACCTTGCTCCGTCGACGACTTCCTCCATATAAGGTGGAGGATTGAGAAGGAGCCT
AATCGGAGCCACCATCACAAAAACAATCACAACCATCATCACCACCAATATCTTTCTAGT
TCTTTGTCTTTTCACTCATGTTAATTAAATTATAGTACTAAGGTTTCCTTGTAATTAAGG
TCTAATTTATTTTTTCTTGGGAAATTTTGACTTTTGTTATTGTACTATCTTGTTAAACAC
ATTTAGTTTTCAATTTATTGAAACAAGCACTTTTAAT