Microarray Probes on PGSC0003DMT400059187
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_42458_PI426222305 |
JHI_St_60k_v1 |
GCTTTGCAAGGTTGAAGGCAAAACTGAGGGCCTGATGACTAAATTTATATTCTATTCATG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400059187
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400059187 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G34930.1 |
+1 |
2e-133 |
430 |
331/983 (34%) |
disease resistance family protein / LRR family protein | chr2:14737169-14739886 REVERSE LENGTH=905 |
Transcript Sequence (3178 bp)
>PGSC0003DMT400059187 3178 pgsc_dm_v3.4
ATTCACAACAACAAAAAAATGTATACCAAAGAACACTACAAACCAATTAATTTGCTTCTA
ATCTGTCTATCGATACTGATCATGCATCAAAGCTTTGCTTTTGGATTAATGTCAAGAGGG
AATAATACGAAAATTTTGTGCATAACAAAGGAGAGGGAAGCTCTTCTCGAGTTCAAACGA
AGTCTCATAGATGAATATAATCTGCTTTCTTCATGGGGAAATGAAGAAAATAATGAGGAA
TGTTGTTCTTGGAGGGGTGTGGAATGCAGTAATATAACTGGCCATATACTCGTCCTTAAT
CTTCGTATAGGTACAATTGAATCCAATCCTGATGGTCCTGATAAGGATCTCATATTGACA
GGCAACATCACTTCTTCATTGGTTAAGTTGCAGTATTTGAAGTACTTAGACCTTAGTTCC
AATAATTTTGGTGGCGACGGACCAATACCCAAATTTATTGGATATTTCAAAAGATTAGAG
TACTTAAATCTCACATCTAGATACAGAGTTTTTACTGGTCTAGTTCCTCTCCAGCTCCAA
AATCTTACCTCCATAAGGACACTTGATCTTCGAGGCAATTATTTAACGGTCAATAGCCTT
GAGTGGATTTCTCATCTAGTGCATTTGGAGTACTTAGATCTAAGTTTATCCAATGTGCAA
GCGAAAAACTGGTTGCAAGAGATAAGTAAGCTCCCAAATTTGAGGGAATTGCATTTGTTT
GGTTGTCAACTCCCCAAAATCATTCCTTCATCACTTATCTTAGCTAATATTTCCTCATCT
CGTCTTTCCATCCTCGACATCTCCTCTAATAGATATTCGTCCCCTGCAATAAATAGTTGG
TTATTTAACTTCACTAGTCTTACTAGCCTAGATCTTTCGAGCAACGACTTAGGCCAAATG
TCTAGTGGCTTTGGGTACTTGAAGTTTTTGGAACATGTTAAGCTATTTGGAAGTGGTATT
CAAGGTGGGATACCAAGGTCTTTTGGGAGTTTAAGTCGTTTACGCTCTATTGATGCAGAT
TCCAATAACTTGTTAAGTCAACCGTTTTCTGAGTTGCTTGATATCTTAGCTGGGAGTAAT
CAATCGCTTGAGTATTTGTCGTTTGAGGGAAATGCATTCACTGGTTCATTGATTAATCTT
ACTAGATTTTCATCCTTGAGGGAATTGAGGCTACGAGAAAACTCTCTGAACGGCATTTTC
CATGAAAGCTTTAGAAAAATCTCCAATCTTGAGTATCTTGATTTGTCTAATAACCAAATG
ACAGGGTCATTACCAGACTTGGCATTCTTTCCATCATTGAGAGAGTTGCACTTACAGTCC
AATCACTTTTATGGAATGATACCACAAGGTTTAGGGAAACTTTCCGAGCTTAAAATCTTG
GATGTGTCTTTCAATAAATTGCAAGGCTTACCGGATAGTTTGGGGCAACTTTCCAAGCTG
AAAATATTGGATGTGTCTTTCAATAGACTGAAAGGCTTATCGGAAAGTTTAGGGCAACTT
TTCGACCTTGAAAGTTTTGATGCTTCTAATAATTTATTAGAAGGTACAATCTCTGAATCC
CATCTTTCCAACCTTTGCAACTTGAAGAGTTTAAAATTGTCTTCCAACTCGTTGACTTGG
AATGTTAGTGTTGATTGGATTCCATGTTTTCAACTCCAAGATATCAGTCTTTCGTCTTGT
AATCTTGGGCCTCTTTTTCCGAAATGGCTTCAAACTCAAAATAGCTACTCATTTCTTAAT
ATCTCTCTTGCTAGTATCTCAGACACAATGCCTATTTGGTTTACAAAGTTGCCTCCCATG
TTATACTTTTTGAATCTCTCTTACAACCAAATCAGCGGGAAGATACAAGATTTATCAGCC
AATAATATCGGTTCCATTGTTATAGATCTTGGTTATAACAATTTTTCAGGACCCTTACCA
ACATTTCCTCATTTGGTTAGTGAATTGCGTGTTGACAACAATAAGTTTTCTGGATCACTT
AACTCCATATGTAAAATTCATTCGCCTGTAACACTTGACTTGTCCGATATTCTCTTGTCC
GGAGAGATTCCTGATTGTTGGACCCTCATGTCTGTTCCAACGGTCCTTAATGTAGCCAAT
AACCGTATATCTGGAAGCATTCCATACTCTTTGTGTTCTTCAACATCCTTGAACTCTCTA
TACGTGCGTAACAACAATTTAAGTGGACAGTTTCCTGCCTCTTTGAAGAATTGCCAAGGT
TTGAAAGTCTTGGATTTGGGAAGAAATAGATTGAGTGGAAAAATCCCAGAATGGATAGGG
ACTAAGTTGGCTGGTTTGGGCATTCTGAGCCTACGATTCAACGAATTTTCTGGTAGCATT
CCTCCAAGTATATGCCAGCTTCAATCTATTCAGATACTGGACCTTTCTGGCAACCATTTA
TCCGGAAGAATTCCAAAATGCTTCAGCAATTTCACCACAATGCAACTTTTGCAAGATGGT
TCAAGTGTGAGCTATGACTTCAATCCACTTGCCGGTAGAGGAATTTTAGTGTACAAAGGC
AATGCATTTGTTCAATGGAAAAACAAGGAATCAGAATACCGTAACACCTTGTGGCTTCTG
AAAACCATTGATCTTTCTAGCAACGAACTAGTTGGTGACATCCCTAAAGATTTTAGCAGA
ATGAACGCATTGCTGTCATTGAACATATCAAGAAACAATTTGACAGGAAGTATCATTGAA
GGAATTGGTTTAATGAAGATGTTGGAGGCTCTTGACTTGTCCGGGAATCATCTCTCGGGG
AAGATCCCAGTAGGACTGGCTAACTTGACATTTCTTAGTGTGTTGGATTTGTCAAAAAAC
AACTTGTCAGGGAGAATACCATCGAGCACTCAATTGCAAAGCTTTGATCCTTCAACCTAT
GGTGGGAATATTCAGCTATGTGGACCTCCTCTTCCAGCATGTCCTACATTTTCTCCTCCA
AATCCTCATGTTGGCTTTGACAGTACTCGTCAAGAAAATGATGATGATGATGAGTTTCCT
TCTAAAGAGTTTTATGTATCGATGGCATTGGGCTTCATTGTCGCATTTTGGGGAATTTTG
GGCTCTTTGTACTTCAATGATTCATGGAGGAATGCATACTTCAAGTGGTTAAATGCCTGC
TTTGCAAGGTTGAAGGCAAAACTGAGGGCCTGATGACTAAATTTATATTCTATTCATG
