Microarray Probes on PGSC0003DMT400059180
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_42448_PI426222305 |
JHI_St_60k_v1 |
AAGTGGTTAAATGGATGTCAGAATTGGCGCTTCATCTTTACTCAGCAGTCTGCTTTGCAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400059180
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400059180 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G34930.1 |
+1 |
4e-122 |
399 |
333/1007 (33%) |
disease resistance family protein / LRR family protein | chr2:14737169-14739886 REVERSE LENGTH=905 |
Transcript Sequence (3199 bp)
>PGSC0003DMT400059180 3199 pgsc_dm_v3.4
AGCAAAAAAAAAATGGATACCAAAGAACACTACAAACCAATTCATTTCCTTTTGATTTGT
CTATCAATGTTGATCATGCATCAAAGCTTAGCTTTTGGATCAACGTTAAGAGTGGATCAT
GCAAACATTTTGTGCATAACAAAGGAGAGGGAAGCTCTTCTCGAGTTCAAACGAGGTCTC
ATAGACGAACATAATATGCTTTCTTCATGGAAAAATGAGGAATGTTGTTCTTGGAGTGGT
GTGAAATGCAGTAACAGAACAGGCCATATACTAGTCCTGAATCTTCGTGGTAACTCCGAC
ATGTCTTTGACAGGTAATATTAGTTCATCATTGGTTAAGTTGCAGTATTTGAAGTACTTG
GACCTTAGTTTCAATGATTTTGGTGGACAAATTCCAAAATTTATCGGTTACTTCGAAAGA
CTAGAGTACCTAAATCTCTCATTTAGTTACAATCATTTCACTGGTCTTATTCCTCTTCAG
TTCCAAAATCTAACAAACTTAAAGACTCTTGATCTTGGTCAAAATTCATTAACAGTGAAA
AGCCTTGAGTGGCTTTCTAATTTAGTGTATTTGGAGTACGTAGATCTTCATTTTTCCAAT
GTGCAAGCGAAAAACTGGTTACAAGAGATGATTAAGCTTCCTAATTTGAGGGAATTGCAT
TTATCAGCCTGTCAACTCCCTGTAATCATTCCTTCATCACTTGTATCAGTCAATATTTCC
TCGTCTCATCTTTCGATCCTTGACATCTCCAATAATAGATATTCGTCCCCTGCAATAAAT
AGTTGGTTATTTAACTTCACTAGTCTTACTAGCCTAGATCTTTCGGGTAACGACTTAGGC
CAAATGTCTAGTGGCTTTGGGTACTTGAAGTCTTTGGAACATCTTAAGCTATTTGGTAAT
AGTATTCAAGGAGGGATACCAAGGTCTTTAAGGAATTTAAGTCGTTTACGCTCTCTTGAT
GTTAGTAACAATTACTTATTAAGTCAACCGTTTTCTGAATTGCTTGATATCTTATCAGGG
AGTAATAGATCACTTGAATTTTTGTCCTTTGAGGAAAATGCACTCACTGGCTCATTGATT
AATATTACTAGATTTTCATCCTTGAAGGAATTGAGGCTACAAGAAAACTCGCTGAATGGC
ATTTTCCATGAAAGCTTTAGACAAATCTCCAGTCTTGAGTATCTTGATTTGTCTTATAAC
CAAATGACAGGGTCAATACCAGACTTGGCATTCTTTCCATCATTTAGAGAGTTGCACTTA
CAGTCCAATCACTTTTATGGAATGATACCACAAGGATTAGGGAAACTTTCCGAGCTTAAA
ATCTTGGATGTGTCTTTCAATAGATTGCAAGGCTTACCGGATAGTTTGGGGCAACTTTCC
AAACTGAAAATATTGGATGTGTCTTTCAATAGACTGAAAGGCTTACCGGAAAGTTTAGGG
CAACTTTTCGACCTTGAAAGTTTTGATGCTTCTAATAATTTGTTAGAAGGTACAATCTCT
GAATCCCATCTTTCCAACCTTTGCAACTTGAAGAGTTTAGAATTGTCTTCCAACTCGTTG
ACTTGGAACGTTAGTGTTGATTGGATTCCATGTTTTCAACTACAAGTTATCAGTCTTTCG
TCTTGTAATCTTGGACCATACTTTCCAAAATGGCTTCAAACTCAAAATGACTACGCATTT
CTTGATATCTCTCTTAATAGTATCTCAGACACAATGCCTAGTTGGTTTACAAAGTTGCCT
CCCATGTTATATTTTTTGAATCTCTCTTACAACCAAATCAGCGGAAAGATACAAGATTTA
TCAGCCAATAATATCGGTTCCATTGTTATAGATCTTGGTTATAACAATTTTTCAGGACCC
TTACCAACATTTCCTTATTTGGTTAGTGAATTGCGTGTTGACAACAATAAGTTTTCTGGA
TCACTTAACTCCATATGTAAAATTCGTTCACCTGTAACACTTGACTTGTCCGATAATCTC
TTGTCCGGAGAGATTCCTGATTGTTGGGCTCTCATGTATACTCTAATGGTCCTTAACTTA
GCCAATAACCATATATCTGGAAGCATTCCGTATTCTCTGTGTTCTTCGACATCCTTGGGC
TCTCTATACGTGCGTAACAACAATTTAAGTGGACAGTTTCCTGCCTCTTTGAAGAATTGC
CAAAGTTTGAAAGTCTTGGATTTGGGAAGAAATATATTGAGTGGAAATATCCCAGAATGG
ATAGGGACTAAGCTGTCTGGTTTGGGCATTCTGAGCCTACGATTCAACGAATTTTCTGGT
AGCATTCCTCCAAGTATATGCCAGCTTCAATCTATTCAGATTCTGGATCTTTCTGGCAAC
CGTTTATCAGGAAGAATTCCGGAATGCTTCAGCAATTTCACCACAATGCAACTTTTGCAA
GATGGCTCAAGTATGAGCTATGACTTCGATCCTTACTTCCCTCATAAAGGTACATTGTAC
CATGGCAATGCATTAGTCCAATGGAAAAAAAAAGAGTCAGAGTACCGTAACATCTTGTGG
CTTCTGAAAACCATCGATCTTTCTAGCAACGAACTAGTCGGTGACATCCCAAATGATTTT
AGCAGAATGAATGCATTGCTGTCATTGAACCTATCAAGGAACAATTTGACAGGAAATATC
ATTGAAGGAATTGGTTTAATGAAGATGTTGGAGGTTCTTGACTTGTCGGGGAATCATATC
TCGGGGAAGATCCCAGTTGGACTGGCTAACTTGACATTTCTTAGTGTGTTGGATTTGTCG
AAAAACAACTTGTCAGGGAGAATACCATCGAGCACTCAATTGCAAGGCTTTGATCCTTCA
ACCTATGGTGGGAATATTCAGCTATGTGGACCTCCTCTTCCAGTATGTCCTACATTTTCT
CCTCCAAATCCTCATGTTGGCTTTGACAGTACTCGTCAAGAAAATGATGATGATGATGAG
TTTCCTTCTAAAGAGTTTTATGTATCGATGGCATTGGGCTTCATTGTCGCATTTTGGGGA
ATTTTGGGCTCTTTGTACTTCAATGATTCATGGAGGAATGCCTACTTCAAGTGGTTAAAT
GGATGTCAGAATTGGCGCTTCATCTTTACTCAGCAGTCTGCTTTGCAAGGTTGAAGGCAA
AACTGAGGGCCTGATGACTAAATTTATATTCTAATCATGAAAAAATGCATCTATTTTGTA
TGTCATTTGTCTATAGGTG
