Microarray Probes on PGSC0003DMT400059158
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_42461_PI426222305 |
JHI_St_60k_v1 |
CTCCATCTTTAGCTCAAGGCCTGATTTATGTTATATGTAAATATCCTATGAATGGCTTGT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400059158
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400059158 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G34930.1 |
+3 |
7e-90 |
308 |
276/854 (32%) |
disease resistance family protein / LRR family protein | chr2:14737169-14739886 REVERSE LENGTH=905 |
Transcript Sequence (2711 bp)
>PGSC0003DMT400059158 2711 pgsc_dm_v3.4
CTTTCACTGGTCTTATTCCTCTTCAGTTCCAAAATCTAACACACTTAAAGACTCTTGATC
TTGGTCAAAATTCTTTAACAGTGAAAAGCCTTGAGTGGCTTTCTAATCTAGTGTATTTGG
AGTACTTAGATCTTCATTTTTCCAATGTGCAAGTGAAAAACTGGTTACAAGAGATGATTA
AGCTTCCTAATTTGAGGGAATTGCATTTATCAGCCTGTCAACTCCCTGTAATCATTCCTT
CATCACTTGTATCAGCCAATATTTCCTCGTCTCATCTTTCGATCCTTGACATCTCCTATA
ATAGATATTCGTCCCCTGCAATAAATAGTTGGTTATTTAACTTCACTAGTCTTACTAGCC
TAGATCTTTCGGGTAACGACTTAGGCCAAATGTCTAGTGGCTTTGGGTACTTGAAGTCTT
TGGAACATGTTAAGCTATTTGGAAGTGGTATTCAAGGTGGGATACCAAGGTCTTTTGGGA
GTTTAAGTCGTTTACGCTCTATTGATGCAGATTCCAATAACTTGTTAAGTCAACCATTTT
CTGAGTTGCTTGATAACTTAGCTGGGAGTAATCAATCGCTTGAATATCTGTCGTTTGAGG
GAAATGCACTCACTGGTTCATTGATTAATCTTACTAGATTTTCATCCTTGAGGGAGTTGA
GGCTACGAGAGAATTCGCTGAATGGCATTTTCCATGATAGCTTTAGACAAATCTCCTGTC
TTGAGTATCTTGATTTGTCTAATAACCAAATGACAGGGTCATTACCAGACTTGGAATTCT
TTCCATCACTGAGAGAGTTGAAATTACGGTCCAATCACTTTTATGGAATGATACCACAAG
GTTTAGGGAAACTTTCCGAGCTTAAAATCTTGGATGTGTCTTTCAACATATTGCAAGGCT
TACCAGATAGTTTGGGGCAACTTTCCAAGCTGAAAATCTTGGATGTGTCTTTCAATAGAC
TGAAAGGCTTACCGGAAAGTTTAGGGCAACTTTTCGACCTTGAAAGTTTTGATGCTCCTT
ATAATTTGTTAGAAGGTACAGTCTCTGAATCCCATCTTTCCAACCTTTGCAAATTGAAAA
GCTTAAACTTGTCTTCCAACTCCTTGACTTGGAATGTTAGCGTTGATTGGATTCCGTGTT
TTCAACTACAAGTTATCAGTCTTTCGTCTTGTAATCTTGGACCAAACTTTCCAAAATGGC
TTCAAACTCAAAATGACTACTCAATTCTGGATCTATCTCTTAATAGTCTCTCAGACACAA
TGCCTAGTTGGTTCTCAAAGTTGCCTCCCATGTTAACATACTTGAATCTCTCTTACAACC
AAATCATCGGAAAGATACAAGATTTATCAGCCAATAATATCGGTTCCATTGTTATAGATC
TTGGTTATAACAATTTTTCAGGACCCTTACCAACATTTCCTCAATTGGTTAGTGCATTGC
GTATTGACAACAATCAGATTTCTGGATCACTTAACTCCATATGCAAAATTCGTTCAGCTG
TAACACTTGACTTGTCCGATAATCTCTTGTCCGGAGAGATTCCTGATTGTTGGACCCTCA
TGTCTGTTCCAATGGTCCTTAACTTAGCCAATAACCATATATCTGGAAGCATTCCGTACT
CTCTGTGTTCTTCGACATCCTTGAGCTCTCTATACGTGCGTAACAACAATTTAAGCGGAC
AGTTTCCAGCCTCTTTGAAGAATTGCCAAGGTTTGAAAGTCTTGGATTTGGGAAGAAATA
CATTTAGTGGAAAAATCCCAGAATGGATAGGGACTGAGTTAGCTTATTTGGGGATTCTGA
GCCTTCGATTCAACGAATTCTCTGGGAGCATTCCTTTAAGTATATGTCAGCTTCAATCTA
TTCAGATACTGGACCTTTCTGGCAACCATTTATCAGGAAGAATTCCGAAATGCTTCAGCA
ATTTCAGCACAATGCAACTTTTGCAAGATGGTTCAAGTGTGAGCTATGACTTCGATCCTT
ACACCCCTCGAGTAGGTACATTGTACCATGGCAATGCACTAGTCCAATGGAAAAACAAAG
AGTCAGAGTATCGTAACATCTTGTGGCTTCTGAAAACCATCGATCTTTCTAGCAACGATC
TAGTCGGTGACATCCCTAAAGATTTTAGCAAAATGAATGCATTGCTGTCATTGAACCTAT
CAAGGAACAATTTGACTGGAAATATCGTTGAAGGAATTGGTTTAATGAAGATGTTAGAGT
CTCTTGACTTGTCGAGGAACCATCTCTCGGGGAAGATCCCAGTAGGGCTTGCTAACCTGA
CATTTCTTAGCGTGTTGGATTTGTCAAACAACAACTTGTCAGGGAGAATACCATCGAGCA
CTCAATTGCAAGGCTTCGACTCCTCAACCTATGGTGGGAATGTTCAGCTATGTGGCCCTC
CTCTTCCAGAGTGTCCTTCATTTGCTCCTCCAAATCTTCATGTTGGTCAAGACAGTAATT
TCCAAGAAAATGATGATGATGATGAGTTTCCATCAAAAGAGTTTTATATATCGATGGCGT
TAGGGTTCATTGTTGCATTTGGGGGGGTGTTAGGATCTTTGTTCCTCAACAGTTCATGGA
GGAATGCCTATATTAAGTGGCTCCATCTTTAGCTCAAGGCCTGATTTATGTTATATGTAA
ATATCCTATGAATGGCTTGTAATCAAGAGAACTTCTTTTATATCTGATATTATAACTTTT
TTTTAAATTCT
