Microarray Probes on PGSC0003DMT400059156
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_42468_PI426222305 |
JHI_St_60k_v1 |
GGATCTTTGTTCCTCAACAGTTCATGGAGGAATGCCTATATTAAGTGGCTCCATCTTTAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400059156
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400059156 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G34930.1 |
+1 |
1e-120 |
394 |
328/972 (34%) |
disease resistance family protein / LRR family protein | chr2:14737169-14739886 REVERSE LENGTH=905 |
Transcript Sequence (2964 bp)
>PGSC0003DMT400059156 2964 pgsc_dm_v3.4
ATGTTAAGAGTGGATCATGCAAACATTTTGTGCATAACAAAGGAGAGGGAAGCTCTTCTC
GAGTTCAAACGAGGTCTCATAGACGAACATAATATGCTTTCTTCATGGAAAAATGAGGAA
TGTTGTTCTTGGAGTGGTGTGAAATGCAGTAACAGAACAGGCCATATACAAGTGCTGAAT
CTTCGTGGTAACTTCGACACGTCTTTGACAGGTAATATTAGTCCATCATTGGTTAAGTTG
CAGTATTTGAAGTACTTGGACCTTAGTTTCAATAATTTTGGTGGACAAATACCAAAATTT
ATCGGCTACTTCGAAAGACTAGAGTACCTAAATCTCTCATTTAGTTACAATCCTTTCACT
GGTCTTATTCCTCTTCAGTTCCAAAATCTAACACACTTAAAGACTCTTGATCTTGGTCAA
AATTCTTTAACAGTGAAAAGCCTTGAGTGGCTTTCTAATCTAGTGTATTTGGAGTACTTA
GATCTTCATTTTTCCAATGTGCAAGTGAAAAACTGGTTACAAGAGATGATTAAGCTTCCT
AATTTGAGGGAATTGCATTTATCAGCCTGTCAACTCCCTGTAATCATTCCTTCATCACTT
GTATCAGCCAATATTTCCTCGTCTCATCTTTCGATCCTTGACATCTCCTATAATAGATAT
TCGTCCCCTGCAATAAATAGTTGGTTATTTAACTTCACTAGTCTTACTAGCCTAGATCTT
TCGGGTAACGACTTAGGCCAAATGTCTAGTGGCTTTGGGTACTTGAAGTCTTTGGAACAT
GTTAAGCTATTTGGAAGTGGTATTCAAGGTGGGATACCAAGGTCTTTTGGGAGTTTAAGT
CGTTTACGCTCTATTGATGCAGATTCCAATAACTTGTTAAGTCAACCATTTTCTGAGTTG
CTTGATAACTTAGCTGGGAGTAATCAATCGCTTGAATATCTGTCGTTTGAGGGAAATGCA
CTCACTGGTTCATTGATTAATCTTACTAGATTTTCATCCTTGAGGGAGTTGAGGCTACGA
GAGAATTCGCTGAATGGCATTTTCCATGATAGCTTTAGACAAATCTCCTGTCTTGAGTAT
CTTGATTTGTCTAATAACCAAATGACAGGGTCATTACCAGACTTGGAATTCTTTCCATCA
CTGAGAGAGTTGAAATTACGGTCCAATCACTTTTATGGAATGATACCACAAGGTTTAGGG
AAACTTTCCGAGCTTAAAATCTTGGATGTGTCTTTCAACATATTGCAAGGCTTACCAGAT
AGTTTGGGGCAACTTTCCAAGCTGAAAATCTTGGATGTGTCTTTCAATAGACTGAAAGGC
TTACCGGAAAGTTTAGGGCAACTTTTCGACCTTGAAAGTTTTGATGCTCCTTATAATTTG
TTAGAAGGTACAGTCTCTGAATCCCATCTTTCCAACCTTTGCAAATTGAAAAGCTTAAAC
TTGTCTTCCAACTCCTTGACTTGGAATGTTAGCGTTGATTGGATTCCGTGTTTTCAACTA
CAAGTTATCAGTCTTTCGTCTTGTAATCTTGGACCAAACTTTCCAAAATGGCTTCAAACT
CAAAATGACTACTCAATTCTGGATCTATCTCTTAATAGTCTCTCAGACACAATGCCTAGT
TGGTTCTCAAAGTTGCCTCCCATGTTAACATACTTGAATCTCTCTTACAACCAAATCATC
GGAAAGATACAAGATTTATCAGCCAATAATATCGGTTCCATTGTTATAGATCTTGGTTAT
AACAATTTTTCAGGACCCTTACCAACATTTCCTCAATTGGTTAGTGCATTGCGTATTGAC
AACAATCAGATTTCTGGATCACTTAACTCCATATGCAAAATTCGTTCAGCTGTAACACTT
GACTTGTCCGATAATCTCTTGTCCGGAGAGATTCCTGATTGTTGGACCCTCATGTCTGTT
CCAATGGTCCTTAACTTAGCCAATAACCATATATCTGGAAGCATTCCGTACTCTCTGTGT
TCTTCGACATCCTTGAGCTCTCTATACGTGCGTAACAACAATTTAAGCGGACAGTTTCCA
GCCTCTTTGAAGAATTGCCAAGGTTTGAAAGTCTTGGATTTGGGAAGAAATACATTTAGT
GGAAAAATCCCAGAATGGATAGGGACTGAGTTAGCTTATTTGGGGATTCTGAGCCTTCGA
TTCAACGAATTCTCTGGGAGCATTCCTTTAAGTATATGTCAGCTTCAATCTATTCAGATA
CTGGACCTTTCTGGCAACCATTTATCAGGAAGAATTCCGAAATGCTTCAGCAATTTCAGC
ACAATGCAACTTTTGCAAGATGGTTCAAGTGTGAGCTATGACTTCGATCCTTACACCCCT
CGAGTAGGTACATTGTACCATGGCAATGCACTAGTCCAATGGAAAAACAAAGAGTCAGAG
TATCGTAACATCTTGTGGCTTCTGAAAACCATCGATCTTTCTAGCAACGATCTAGTCGGT
GACATCCCTAAAGATTTTAGCAAAATGAATGCATTGCTGTCATTGAACCTATCAAGGAAC
AATTTGACTGGAAATATCGTTGAAGGAATTGGTTTAATGAAGATGTTAGAGTCTCTTGAC
TTGTCGAGGAACCATCTCTCGGGGAAGATCCCAGTAGGGCTTGCTAACCTGACATTTCTT
AGCGTGTTGGATTTGTCAAACAACAACTTGTCAGGGAGAATACCATCGAGCACTCAATTG
CAAGGCTTCGACTCCTCAACCTATGGTGGGAATGTTCAGCTATGTGGCCCTCCTCTTCCA
GAGTGTCCTTCATTTGCTCCTCCAAATCTTCATGTTGGTCAAGACAGTAATTTCCAAGAA
AATGATGATGATGATGAGTTTCCATCAAAAGAGTTTTATATATCGATGGCGTTAGGGTTC
ATTGTTGCATTTGGGGGGGTGTTAGGATCTTTGTTCCTCAACAGTTCATGGAGGAATGCC
TATATTAAGTGGCTCCATCTTTAG
