Microarray Probes on PGSC0003DMT400059155
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_42441_PI426222305 |
JHI_St_60k_v1 |
GAGGGCCTGATAAATGTCAAGTTTCTGTGTACTTGTTTACTTTTTAAGAGTTAGCTTGTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400059155
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400059155 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G34930.1 |
+2 |
7e-67 |
210 |
138/381 (36%) |
disease resistance family protein / LRR family protein | chr2:14737169-14739886 REVERSE LENGTH=905 |
Transcript Sequence (2327 bp)
>PGSC0003DMT400059155 2327 pgsc_dm_v3.4
CTTGAACATCTTAATCTTGCTAATAACTTTTAAGATTAAAGGTGGGGTTCCCAGTTCTTT
CGAGAATTTGACCTGTTTACGTCATCTGGACATGTCTAATACTTAGACAGACCAATGGCT
TCCTGAGTTGTTTCTCAGGTTATCAGGCAGTAGGAAATCACTTGAGGTTTTGGGGTTGAA
CGACAACTCATTGTTTGGTTCAATTGTTAATATGACAAGATTTTCATCCTTGAAGAAATT
ATACCTGCAGAAGAATGTGCTGAATGGTTCTTTCATGGAAAGTGCGGGACAAGTTTCTAC
CCTCGAGTATCTGGATTTGTCTGATAACCAAATGAGAGGGGCATTACCAAATTTAACATT
GTTTCCATCATTGAGAGAGTTGCATCTTGGCTCTAATCAATTTTCAAGGGAGGATACCAC
AAGGTATCAGACAACTTTTACAGCTTAGAATTTTGGATGTCTCGTCCAATAGACTGGAAG
GATTACCAGAAAGTATGGGGCAACTATCTAATCTGGAAAGTTTTGATGCCTCTTACAATG
TCCTGAAGGGTACAATTACTGAGTCCCACCTTTCAAACCTCTCCAGTTTAGTGGATTTGG
ACTTGTCATTCAACTCATTGGCTCTGAAGACGAGCTTCGATTAGCTTCCTCCTTTCCAGC
TACAAGTTATAAGCCTGCCGTCTTGCAATTTGGGACCTTCTTTCCTAAAATGGCTTCAAA
ATCAACATAACTATACTGTTCTTGATATCTCTCTTGCAAGTATTTCAGACACGCTTCCAA
GTTGGTTCTCTGGCATTCCTCCCGATCTAAAGATTTTGAATCTCTCAAACAACCAAATCA
GTGGAAGAGTGGAAGAGTGTCTAACTTAATAGAGAATACATATGGTTACAAGGTTATAGA
TTTAAGCTCTAACAACTTTTCAGGGCCTTTGCCAATAGTCCCTACCAATGTCCAAATATT
TTACCTGCATAAAAATCAGTTTTTTGGATCCATCTCTGCAATTTGTCAAAGTAAAACATC
CCCCACTTCTCTCGACTTGGCACACAACCAATTCTCAGGAGAACTTCCAGATTGTTGGAT
GAACATGACAAGTCTAGCTGTTCTTAATCTAGCTTATAACAATTTCTCTGGAGAAATTCC
ACATTCATTGGGTTCCTTGACAAATTTGAAGGCGTTATACATACGCCAAAACAGTTTTAG
TGGAATGTTGCCTTCTTTTTCACAATGTCAGCAGTTGCAAATCTTGGATCTTGGAGGGAA
TACGTTGACAGGAAGTGTCCCGGCATGGATAGGGACTGATCTACTCAATTCGCGCATTCT
AAGCATGCGGTTCAACAGATTGCATGGCAGCATACCGTCCATAATCTGTCAGCTTCAATT
TCTTCAGATACTGGACCTTTTAACAAATGGATTATCAGGGAAAATTCCACATTGCTTCAA
CAATTTTACCTTATTGTATCAAGATAATAATTCTGGTAAGCCAATGGAATTTATAGTTCA
AGGTTTCTATCGTAAATTTCCTCGTCGTTACTTGTATATTGGTGACCTATTGGTTCAATG
GAAAAATCAGGAGGCTGAGTACAAAAATCCTTTATTATATCTGAAGACTATTGATCTTTC
AAGTAATGAATTGGTTGGAGGTGTTCCTGAAGAAATAGCTGAGATGAGAGGATTGAAATC
TTTGAATCTATCAAGAAATGATCTGAATGGAACTGTCGTTGAAAGAATAGGTCAAATGAA
GATGTTGGAGTCTCTTGACATGTCAAGAAACCAGCTTTCTGGTGTGATCCCCCAGGGTCT
TGCGAATTTGACTTTTCTTAGTGTGTTGGACTTGTCGAACAACCACTTATCCGGGAGAAT
TCCATCAAGCACTCAACTGCAAAGTTTTGATAGATCATCCTACAGTGATAATGTTCAACT
CTGTGGTCCTCCTCTTCAAGAGTGTCCCGGATATGCTCCTCCTAGCCCTCTTATCGATTA
TGGTAGCAACAACAATCCATAAGAACATGATGACGATGAAGAGGAGTTCCCATCGCTGGA
GTTTTATATATCAATGGTGCTAGGCTTTTTTGTTGCATTTTGGGGAATTTTGGGCTGTTT
AATTGTCAATAGTTCTTGGAGGAATGCCTACTTCACATTCTTAACGGACACGACAAGTTG
GCTCAATATGATATGAAGAGTCTGGTTTGCAAGACTCAAGAAAAAACAGAGGAGGGCCTG
ATAAATGTCAAGTTTCTGTGTACTTGTTTACTTTTTAAGAGTTAGCTTGTTTTCTTGTTC
TTCTTCCTACCTGATAGTTGCTTTCCTCTTGTTGTGATTTCTATCTG
