Microarray Probes on PGSC0003DMT400059101
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_49267_PI426222305 |
JHI_St_60k_v1 |
GCTTGTAGGTTGTATAGAAAAATTGAGGTGTTCATGGTAAAAGTGTCTGGATTTCTAGTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400059101
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400059101 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G05190.1 |
+1 |
4e-20 |
96 |
44/87 (51%) |
Protein of unknown function (DUF3133) | chr5:1541853-1543875 FORWARD LENGTH=615 |
Transcript Sequence (3169 bp)
>PGSC0003DMT400059101 3169 pgsc_dm_v3.4
GAGTTAACATAAGTGAATTATGGTTTAAGTTGAAATGACTTCCTCACAAATTTTATCTTG
GATGCAGCTAAGAATAGGAAAAGAGCTCCTACAAAGAACAACGTACTTGATCAGAATGAA
ATAAGCAGCGCAAGTGAAGAAGCTTGTCCTCCTTTGAAAGGAGATTCTTCACCGAACGAA
TGGAAGAAGTCAGATCAAGGGGGCGCTGGAGACTATAACAAGGAGCTACCTCGACAGTTA
AATTCCACCGATGAGCTTCCAAGCTCTTCTGGGGTTAGCTGCCTTGAGAATGAAGATCCT
TTATCCAAATCTGCAGTACATAAAGGAGATGAACACAGTTGTTCTTTGGATGAAAAGACG
GAACAGTATGAAAATGGATCTCGGGATCACCACCAGTTTGCAGGAGGAGAAAACTTCTCC
AATAGACTTGCTAGCTCAGATCAACTTACTTGTCCAGAATTGGGAAATTCAATTGTTGAA
GCGAAAGAAGATGCCGAAGGTTCAGCTATTGAAAAGAGAGAGAAACTGGAGCTGGATAAA
GACACTGGATGCTCAACCCATGAAACTGAACAAGATATGGAAGTTTTACCCCTTGAAGTG
ACAGAGCAACTGGAACTGGATGAAGGCAACTTGGTGGATGACTGCACTGTAAATGATCAA
AATAGAAGCGGAGTTAATCATAAGAGTAACTCCCTTGATGAGAATTCTACTTACTCTGGA
TGTGTCATTCACAGAGATAAAGTGTCTTCTGGAAGTAGGGCACATGAAGATGGAATTGAA
AGCAAATCTCTTGTGGAACAAATCATTGGAAGGGGACAAAATGATTTCCAAGGTCACAAT
GCAGAATCTTCTGAAAATGTAAGGTACCCCAAGGAAACCTCTTTATCTGCTGAGGTAGCC
AGTGACTTTGAGAAGCAGTCATCTGCATGCTCTGACATGTTCCAAAGTATTTTGAATGAA
AGCATCACATCAGACACTTTGATGGCTACTGATTACGAGCAATTTGAGCAATTTCATAAA
GAGATTCCCTCAGGTTTTGACCGTATAAGCTCTATGGATACATTAGAAAATCAACCTCTA
AATATTTATCGATCTGAGCCTCCTGTCAATCACAGAAATATGATCAGATCTCCTACACAT
AGAAGTTACTATGGCTATGATGGCAGTGCATCTTCATGTGACGAGAATGATGATATACCT
GATCAGTACAATCACCAACCTGTCAGAAAGTTTAAGGAAGCATACCCTGTCAGCCCTGGT
GAGTTTCTTTTGGATGGTAGAAGCCGAGTAAACCACAAAATGAGTGGTGAGTCGAAGATG
GTGCAGCGAGCAATGAACTTTCCCACAGCATTACCAGGAAGGGGTCATCAAGCTACAGAA
GGCAGCAACTGGAGTCAGAAGCCTCAGTCTAGAAAACGTGGTCAGGCCTCTGGAGGTAGA
ATGACATTGGACAAGGATGAGCATGCCACAACATTTCCGTTTATTTCAACAGGTTCTCAT
GCAGGACATAATCATGGAAACCCTTCAAATTATCGGAAAAATATGACCCACCATTCTGGT
CTCCTTCCACCCAGAAAGCCCTCAGATTCAGAACCAGACAAAATACAATTGTTGAGAATG
GTGTATGAACTTGAAGATCAATTGCGCCAGACACGTATTACTACAAGGATGGCCAATGGA
GCCAATGGGCGGTTTTCTGCAGAGCCAATGAGGGATGAAGAGTATAACCCCTCATACTAC
GATCAGTTTTTGGAAGATGGTGAAGTAAGTGGTGATTTGAACTATTCTAGATATCCTGTA
AGAGGCAGTCATGGAAAAGGCTGGCCGCAACAACGTAAAAGCTCAAGAATACCTTTTTCT
GCAGAGGTTTCACATTACAGGCACCAAGCTGATTGCCTGTGTTCACATTGCTCCCCTAAG
GTCCGGCATTTCTCAGCGCAGCTGCATCCTTCAGTTTGCTATAACAAAGGCCGTGGGGTT
GGCTATTCCAGCTGTAACTGCTGCAATCACCTCCAGTCTGATTCTTCAAGCCCTCAGCAT
TACTCAAGCTCTGAGTATTCTCGATGGGACCATGATACAAAATCTGATGATAGGAGGCAC
AAAGATCATGAGATGAAGAAACTGTATCTGCGAGAAAAATACTCAAAAATGCGGCATCTC
CGACCAGTAGCTGGTGGAGCCCCAATAATTTCTTGTTACTACTGCAACGAACTTCTACAG
CTGCCTGCAGACTTTCTTCTTTTCAAAAGGAGATGCCATCAGCTTAGATGCAATGCTTGT
AGGAAGGTGCTGAAGTTTTCTCTCCAAAACCAGATACATGTAGTCCCATTCCATGCAGAG
GCTTTAGCTCCTCCACCAAGTGAGGTTGATGACAGCACTGGTGTCACTGATCATCAGAAT
CTGGCATATGAATATCATCTTAATTCTTGTCCCCGTACTGAACGAATATCGTGTTCTGAT
GATTTGGGACCATCTTTCTGCAGAAGCATCTCTACTGAAGGGGAGCCTTCACTACCTCCA
ATTCAACCTCGTGGAAGGACCTCTTTCAATGGAGAGATATCCTCTAGTAGTTCTTATGCT
CCCACAAAAGACAGAAAAATGAAATCCGTCATGAGGGAACCTCGTATGGGGACCTTTGGA
TCACCAGAGCCTTCAGCTAAGATGTCTAAGTGGGGAAAAGTATCATCTTCAGAAATTGAG
GAAGTACGACCAAACGGAGGCTCTCCTCTTCATCGGCTTATGGGTTATGAATCGCCAAGC
GAAGTGATACATTGGTGACTGGCTCAACTTTCAGGAAATGAAACAACGATCAAAAAGAAA
GAGGCAAGTCATTAGGCAACAAAGAGCAATAGATTGGTAATTTTTGATAGATACTTGACA
TAAAGGGATCGATATTCTTGGTGTTAAAGATGTTGAAACACAAACAATATTTCGTTTAGG
CGCTCATCCATTTGTATATCCTGAGTATCATTTTTTTCTCTATAGTTTTTCACTTCACAC
TATGTACAGGTGAAATCAAAGTGGCAGCTTGTAGGTTGTATAGAAAAATTGAGGTGTTCA
TGGTAAAAGTGTCTGGATTTCTAGTTATTTGTGTGATGATAATTATATGTATATTTAGAA
TAAAGGACATATTCAGTTTTTCTTCTTATCTTCTAAAGTTCATTGTTTA
