Microarray Probes on PGSC0003DMT400058933
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_9393_PI426222305 |
JHI_St_60k_v1 |
GGTGGACTAGTGAGTCTTCTCTGCATATATGTAATATCAAGATGTATGTTTGTATCTACA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400058933
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400058933 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G17420.1 |
+3 |
0.0 |
1285 |
648/876 (74%) |
lipoxygenase 3 | chr1:5977512-5981384 FORWARD LENGTH=919 |
Transcript Sequence (3017 bp)
>PGSC0003DMT400058933 3017 pgsc_dm_v3.4
AAATCCTTCATTTTTTTTCCTCTCTCCCAATTCATTTGTAAGAGAAAGGAAAAAAAAACC
CAGAAGAAGCACCATATATTGCAACGTAAATTAAAGAAAGAAAATTATTAATGGCACTTG
CTAAAGAAATTATGGGTATTTCCCTGCTGGAGAAATCATCATCATTTATGAACTCATCAT
CAATGGCACTTTTTAATCCCAATAATTATCACAAAGAAAATCATCTTTGGTTCAACCAGC
AGTTTCAAGGAAGGAGGAATTTAAGTAGAAGAAAAGCGTTCAGACAGAGTACTATGGCAG
CTATAAGTGAAAATTTGATCAAAGTTGTGCCTGAAAAAGCAGTGAAATTCAAAGTGAGAG
CTGTAGTTACAGTGAGGAACAAGAACAAGGAAGATCTGAAGGAGACAATTGTGAAGCATC
TTGATGCTTTCACCGACAAAATCGGGAGGAATGTCACGTTAGAGCTCATCAGCACTGACA
TGGATCCAAATACAAAAGGACCGAAGAAGAGCAACCAAGCAGTGTTAAAGGACTGGTCTA
AGAAATCGAACTTGAAAACAGAGCGAGTAAATTACACAGCAGAATTCATTGTGGACTCGA
ATTTCGGAAATCCAGGCGCGATCACAGTGACGAACAAGCACCAGCAAGAGTTCTTTCTGG
AGAGTATTACTATTGAGGGCTTTGCATGTGGTCCAGTTCATTTCCCCTGTAATTCATGGG
TTCAACCCAAAAAAGATCATCCTGGAAAAAGAATATTCTTCTCTAATCAGCCATATCTAC
CGGATGAAACACCAGCAGGACTCAAATCATTAAGAGAGAGGGAGCTAAGAGATTTAAGAG
GCGATGGAAAAGGCGTCAGAAAATTATCTGATAGAATATATGATTATGACATCTATAATG
ATCTTGGAAATCCAGATAAAGGCATTGATTTTGCTCGTCCTAAACTTGGAGGAGACGACA
ATGTTCCTTACCCGAGACGTTGTCGTTCTGGTCGTGTTCCTACAGACACAGATATAAGTG
CGGAGAGTCGTGTGGAGAAGCCAAATCCGACGTATGTTCCGAGAGATGAACAATTTGAGG
AGTCTAAAATGAATACATTCTCAACTTCCAGGCTTAAAGCAGTGCTCCATAACTTAATTC
CATCTCTAATGGCCAGCATTTCTTCTAACAATCACGATTTCAAAGGATTTTCAGATATCG
ATAGCCTTTATAGCAAAGGGCTACTTTTGAAGCTTGGTCTTCAGGACGAAGTCTTAAAAA
AGCTTCCATTGCCTAAGGTTGTTAGCAGTATCAAAGAAGGAGATCTGCTCAAATACGACA
CGCCAAAGATACTATCAAAGGACAAATTTGCCTGGTTACGAGATGATGAATTTGCTCGAC
AAGCAATAGCAGGAGTGAACCCGGTATCCATCGAAAAACTTCAGGTTTTTCCACCAGTAA
GCAAGCTTAATCCTGAAATCTATGGCCCTCAAGAATCCGCCCTCAAGGAGGCGCACATTC
TTGGTCATCTAAATGGCATGACTGTTCAAGAGGCTTTGGATGCAAATAAGCTTTTCATTG
TGGATCATCATGATGTATACCTTCCATTTCTCGATCGGATTAATGCACTTGATGGCCGCA
AAGCATATGCAACACGCACCATTTTTTTCTTGTCTGATGTTGGCACCCTTAAGCCCATTG
CCATTGAACTTAGCCTCCCCCAAACTGGTCCAAGTTCGCGATCCAAACGTGTTGTCACAC
CACCTGTTTGTGCCACTGGTAACTGGACGTGGCAGATCGCTAAAGCACACGTCTGTGCTA
ATGATGCTGGAGTTCACCAACTCGTCAACCACTGGTTGCGTACACATGCATGCTTGGAAC
CATTTATATTGGCAGCACATAGGCAATTAAGCGCGATGCATCCGATTTATAAGCTTTTGG
ATCCACATATGAGATACACTCTAGAAATTAACGGCTTGGCTCGCCAGAGCTTGCTCAATG
CTGATGGTGTCATCGAGGCTTGCTTTACTCCTGGTCGCTACTGCATGGAGATCAGTGCTG
CTGCCTACAAGAATTGGCGCTTCGATTTAGAAGGCCTTCCAGCTGACCTCATCCGAAGAG
GGATAGCAGTACCGGACTCAACACAACCTCATGGGCTGAAACTTCTAATTGAGGACTATC
CTTATGCTGCAGATGGGCTTATGATATGGGGCGCAATCGAGGGCTGGGTTCGTGATTACG
TAAACCAGTACTACCCATCCTCGGCCCAAGTTTGCAGTGACAGGGAGCTGCAAGCTTGGT
ATGCCGAGACTATTAATGTGGGCCACGTTGAGCTCCGCAATGAGGATTGGTGGCCCACAT
TAGCTGCTCCAGAGGACCTCATTTCCATCCTCACCACCCTCATCTGGCTGGCTTCAGCGC
AACACGCTGCACTGAATTTCGGGCAGTACCCTTACGGTGGCTACGTCCCAAACCGGCCAC
CACTCATGCGTCGATTAATCCCTGACGAGAACGATCCCGAGTACGCGGTGTTCCTAGCTG
ATCCACAAAAATATTTCTTCTCAGCTTTACCAAGTTTGTTACAAGCAACAAAGTTCATGG
CCGTGGTTGACACATTATCGACACATTCCCCGGACGAAGAATACTTGGGGGAAAGACATC
AACCGTCTACTTGGACCGGAGATGCAGAGATTGTTGAAGCGTTCTACAAATTTTCCGCGG
AAATAGGGAGAATTGAGAAGGAGATAGATGAAAGAAATGCCGATACGAAACTAAAAAATA
GGTGTGGTGCTGGTGTGTTACCATATGAACTATTGGCACCAAGTTCAGGCCCTGGAGTAA
CATGTAGAGGTGTTCCAAATAGTGTATCAATATGAGTAATTATAAGTACATATATATAAC
CAATGTTTATAAAGTCCATAAATAGGGTGGACTAGTGAGTCTTCTCTGCATATATGTAAT
ATCAAGATGTATGTTTGTATCTACAGCTAGATTTTTGTAAGAACATTAATTAAATTAAAT
AATTAGCTACTAATACT
