Microarray Probes on PGSC0003DMT400058932
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_9167_PI426222305 |
JHI_St_60k_v1 |
GGTGGACTAGTGAGTCTTCTCTGCATATATGTAATATCAAGATGTATGTTTGTATCTACA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400058932
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400058932 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G17420.1 |
+2 |
0.0 |
733 |
343/438 (78%) |
lipoxygenase 3 | chr1:5977512-5981384 FORWARD LENGTH=919 |
Transcript Sequence (1495 bp)
>PGSC0003DMT400058932 1495 pgsc_dm_v3.4
AATGTGACAGGCTTTGGATGCAAATAAGCTTTTCATTGTGGATCATCATGATGTATACCT
TCCATTTCTCGATCGGATTAATGCACTTGATGGCCGCAAAGCATATGCAACACGCACCAT
TTTTTTCTTGTCTGATGTTGGCACCCTTAAGCCCATTGCCATTGAACTTAGCCTCCCCCA
AACTGGTCCAAGTTCGCGATCCAAACGTGTTGTCACACCACCTGTTTGTGCCACTGGTAA
CTGGACGTGGCAGATCGCTAAAGCACACGTCTGTGCTAATGATGCTGGAGTTCACCAACT
CGTCAACCACTGGTTGCGTACACATGCATGCTTGGAACCATTTATATTGGCAGCACATAG
GCAATTAAGCGCGATGCATCCGATTTATAAGCTTTTGGATCCACATATGAGATACACTCT
AGAAATTAACGGCTTGGCTCGCCAGAGCTTGCTCAATGCTGATGGTGTCATCGAGGCTTG
CTTTACTCCTGGTCGCTACTGCATGGAGATCAGTGCTGCTGCCTACAAGAATTGGCGCTT
CGATTTAGAAGGCCTTCCAGCTGACCTCATCCGAAGAGGGATAGCAGTACCGGACTCAAC
ACAACCTCATGGGCTGAAACTTCTAATTGAGGACTATCCTTATGCTGCAGATGGGCTTAT
GATATGGGGCGCAATCGAGGGCTGGGTTCGTGATTACGTAAACCAGTACTACCCATCCTC
GGCCCAAGTTTGCAGTGACAGGGAGCTGCAAGCTTGGTATGCCGAGACTATTAATGTGGG
CCACGTTGAGCTCCGCAATGAGGATTGGTGGCCCACATTAGCTGCTCCAGAGGACCTCAT
TTCCATCCTCACCACCCTCATCTGGCTGGCTTCAGCGCAACACGCTGCACTGAATTTCGG
GCAGTACCCTTACGGTGGCTACGTCCCAAACCGGCCACCACTCATGCGTCGATTAATCCC
TGACGAGAACGATCCCGAGTACGCGGTGTTCCTAGCTGATCCACAAAAATATTTCTTCTC
AGCTTTACCAAGTTTGTTACAAGCAACAAAGTTCATGGCCGTGGTTGACACATTATCGAC
ACATTCCCCGGACGAAGAATACTTGGGGGAAAGACATCAACCGTCTACTTGGACCGGAGA
TGCAGAGATTGTTGAAGCGTTCTACAAATTTTCCGCGGAAATAGGGAGAATTGAGAAGGA
GATAGATGAAAGAAATGCCGATACGAAACTAAAAAATAGGTGTGGTGCTGGTGTGTTACC
ATATGAACTATTGGCACCAAGTTCAGGCCCTGGAGTAACATGTAGAGGTGTTCCAAATAG
TGTATCAATATGAGTAATTATAAGTACATATATATAACCAATGTTTATAAAGTCCATAAA
TAGGGTGGACTAGTGAGTCTTCTCTGCATATATGTAATATCAAGATGTATGTTTGTATCT
ACAGCTAGATTTTTGTAAGAACATTAATTAAATTAAATAATTAGCTACTAATACT
