Microarray Probes on PGSC0003DMT400058917
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_9368_PI426222305 |
JHI_St_60k_v1 |
GCGGAATCTAAATTTGTGGCTATACCAAAACTTTTTTCCTAACAACTTCTGAGGTTGTTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400058917
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400058917 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G19180.1 |
+3 |
2e-22 |
97 |
92/284 (32%) |
jasmonate-zim-domain protein 1 | chr1:6622312-6623271 FORWARD LENGTH=253 |
Transcript Sequence (1404 bp)
>PGSC0003DMT400058917 1404 pgsc_dm_v3.4
GTAATTTCCTTTATCTACCCCACCTTTTCATCTCTATTCTCTACCATAACATTCACATGT
TCCTTCCTCTCTACTACATAACTTCTCTAGCTACCAGAAAATAGTCACAATTCTTCATTT
CTGTTTCTATCAATTTTGGAATTTTCTCGTCGGAAAATATGTCGAATTTGTGTGACGGCC
GCAGGAGGACTGGAGACGGCAAGGCGCCGGAGAGATCGAGTTTCGTACAGACTTGTAACT
TGTTGAGTCAGTTTATTAAAGGGAAAGCTACTATTAGAGATCTGAATCTCGGAATCGCCG
GCCAAACGGAAGCTGCAGGGAAAACTGAAACTGCAACTATGGATTTATTAACAGTCATGG
AAAAACCATCTATTGATCTAACTAAAGAAGAACACAAATCCGTAGATCTTGTTACAACAG
AGTCTTCTAGAGAGAAGGAGGCCGCTGTAAATGAGCCCAGCACGAGTAAAGAGGCACCAA
AGGAGCCTAAAGCAGCCCAATTGACTATGTTCTATGATGGTAAAGTGATTGTTTTTGATG
ATTTCCCAGCTGACAAAGCTAGAGCAGTGATGTTATTGGCTAGTAAAGGATGTCATCAGA
GTTCATTTGGGACTTTCCAGACTACAAACATCGACAAAATTAACACATGTACTACTGCCC
CTGCTTCTTTGACAAGTAACAGAACTGATTCTGTTGCACCACAGCAACAACACCTCCAGA
TTAAGCCAGACTCTAGCTCTGCTGCACCGCAACAGCACAAGCACAATCTGCCGCCACTCC
ATGTTTGTAGTAGTACAAAAACTGATCAGCTTAAGCGCGGATCAGTTTCATCTGCACCCT
TAGTAGAGCAGGAGCAACACAAGCAAATCCAGTCACAGGCTGCCGGAATTAGCAGCAGCT
CCGAGCTACCTATTGCAAGAAGATCTTCACTACATAGGTTTCTTGAGAAGAGGAAAGATA
GGTAAGCGGAATCTAAATTTGTGGCTATACCAAAACTTTTTTCCTAACAACTTCTGAGGT
TGTTTTGTTTAAAAGAATCTCACTTCTTTTTCCGTCTAATTCAGGGCAATTGTTAGAGCT
CCATACCAAGTTGTACATAACAATCCGTTGTTACCATCGTCTTCAAATACTAATGGTGAA
TCATCTTCCAAGGATAGCGAAGATCAGCTTGATCTCAATTTCAAGTTATAGCCAAAACTC
CACTCTCGCAGTTGGAATTCCATAAGCTTTTTTTTGGTTGACGACTGGATAAGCTAGTAG
TATTAAATATATATTTAGATCAGTGATTTGAAGATTATTTTTCCAGCACAGCTTAGCTTA
CAGATTATATTTCTTGTATTAGATATTGTTTATTATTACCAACCGAATGTTATGACTCTT
TGATTTGTTAAAATAGAATGCGTA
