Microarray Probes on PGSC0003DMT400058104
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_8870_PI426222305 |
JHI_St_60k_v1 |
GCATAACTTGCAGAACCTGATAGATGGAACATATAGATTCTCTCTGGATTTACAATCATT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400058104
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400058104 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G35920.1 |
+1 |
0.0 |
555 |
286/424 (67%) |
PLAC8 family protein | chr4:17012106-17014192 REVERSE LENGTH=421 |
Transcript Sequence (2131 bp)
>PGSC0003DMT400058104 2131 pgsc_dm_v3.4
GGATTGGATTATACTTTTTCAAACCGAAAACCGAAAAACCCAAATCGAATAACACAAAAC
CGAACCGAAAAACCGAATGCACACCCCTAGTTTCCACTGAAATCCAAATTGTGGACTCTG
CTCTCTCTCTGTTTGTATGTATAGTGCAGCAAATCGGAGCTCCCATACAAACAACACCGA
AGCCGGTGACCCCTCTTTCTCTCTCTTACACACGGAGTCATATACACATTCTCTCTCTTC
TTTTCTCTGGTTCAGAGTCAGAGATTTGGGGTCACTGTAACTTGGAAAAGTTCCAGAAAA
TTACAAATCCAGAAGGTGTTTCCCTCAATTCAATGTCTCTCTAAGCTGATCAGGATCTTC
ATCGAAAATCAGTAATTGCAAGATCTGTTGTTAAGCTGACTATGTGGGAGCTGTTGAGAC
GGATCATCTATTTCTCGTCCATTTTTTGAATGACGGTAGTGTCTGGGTCAGTTGAACTCA
CATTGACTGATTCATTGGATTGCCTGATACAATCAATAAACATAGGATAATTTAGTTATC
AACTTGTCCAAGAAAAGAAAAAGATTAAGCTGGGGAAAGTCTACTAGTTTAAAACATTAA
GAGTTTTGAGTGAGCTGCTGTTCATTTATGGTCATTCTTTTGATATGGGCATGTGCTTGT
AGTTGAATCTATATAGGGTGTTGACGGAATAATCTGTGATTGAGAATGGCTACATGGGAA
CACTTTGGGGAAATTGCAAATGGTGCCCAGCTTGCTGGCCTTGATGCAGTGAAGCTAATT
GGTTTGATCGTAAAAGCTGCAAGCACAGCTCGAATGCACAAGAAGAATTGCAGGCAGTTT
GCGCAGCATCTCAAATTAATCGGTAATTTATTGGAGCAGCTTAGAATTACAGAACTCAAG
AAGTATCCTGAAACCTCCGAGCCATTGGAATATCTTGAAGATGCATTAAGGAGGTCTTAC
ATTTTGGTCAACAGCTGCCAGGATCGGAGCTATCTTTATCTGTTGGCTATGGGATGGAAC
ATTGTCTACCAGTTCCGGAAGGCCCAGAATGAGATTGACCAGTATTTGAAGATCATTCCT
CTCATCACGCTTGTGGATAATGCTCGAGTCAGGGAGAGATTTGAAATCATTGAGAAGGAC
CAGTGTGAATATACTTTGGAGGCTGAAGACATGAAGGTGCAAGAAGTCATTTTAAAACGA
GATCCCTCTAAACATGATACAATAGTGTTAAAGAAGACCCTTTCCCGTTCCTACCCAAGC
ATGCCTATCACTGAGGCAATTCAGAAGGAGAATGAAAAGCTTCAGCTAGAACTGCAACGT
TCACAAGCTAATTTAGATGTAAATCAGTGTGAATTCATTCAACATCTTCTCGATGTCACA
GAGGTAGTTGCAGCTGAGTCTCTTTCCGAGAAGAGTTCACCCACCCAGCCTACCAAAAAG
TTGGAGCATAGTCACTCAGATGCCAATAGTGACAAGGAACACAGTGATAAAAGTTATATC
AAAAGTGATGAGAAACACTCAACTTCAAGAAACACTTCTTCAGTTTCATCACAACGTGAA
CTGCTGTCTTCAAAGGGTTCATATCGATATGAAGAGTGGCATACAGATCTGTTGGGATGC
TGTTCAGAACCTCTCCTATGCATTAAAACCTTTTTCTTTCCTTGTGGTACATTTTCTAAA
GTTGCCAGTTTTGCAGCCAACAGAGACATATCTTCAGCGGACGCTTGTAATGAATTAATG
GCTTACTCGTTGATACTGTCCTGCTGCTGTTACACTTGCTGCATCAGAAAGAAACTTCGG
CAAAAGCTAAACATCACGGGAGGCATCATAGATGATTTTCTTTCACATTTAATGTGCTGT
TGCTGTGCTCTCGTCCAAGAATTGCGTGAAGTGGAAATACGTGGGGCTAATGGTACAGAG
AAGACGAAAACGAGCCCGCCACCCTCTCAATTTATGGAAACATAGGAAATTGAAATTGAA
ATTGTCTAAACATATTAGAGCATAACTTGCAGAACCTGATAGATGGAACATATAGATTCT
CTCTGGATTTACAATCATTTTGTAAAGTAATTCTTAGTAATCCAGATTTAATGTGTACAA
ATATAATCTTTTTAGTTTTCAATGGTTCCAT
