Microarray Probes on PGSC0003DMT400057442
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_15305_PI426222305 |
JHI_St_60k_v1 |
GATCAACTTTTGGTTGAATTGAGAAGGTTTCTGTTATTGCTTGTGCTATTGTTTAGAGTG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400057442
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400057442 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G20300.1 |
+1 |
2e-179 |
524 |
290/418 (69%) |
Protein of unknown function (DUF3537) | chr3:7079832-7081809 REVERSE LENGTH=452 |
Transcript Sequence (2166 bp)
>PGSC0003DMT400057442 2166 pgsc_dm_v3.4
AAAAAATTCTAACTCCGCCGCGGCGATCGTAAGCAAGTTAAAATCCCCCAAACAAAACAA
CTAGTGCAAACATGATCTTCAGTCTCAGCTGTACTAGGTATTTTTCACAATCAACATTAC
CCCACCACATGTATATAAACCTTTCTCTTCCAATAATCAAACTCCATTAAACCTCACCAG
ATCCACAAATCCCGGCACTCCACAATAATCTCTCTCCATTTTCATCAAACAAAAACTAAT
TTTTCTGCAATTTCATCAAACACCCAGAAAAAAAAAATCATTTTTTTCTCCATTTTCATC
AAATACCCAGTAAAAAGATTTAAGCTTTTTTCAATTTCATCAAACACCCAAAAAAAAAAA
AAAAAAAAATTAATCTTTTTCCATTTTTATCAAACACCCAGAAAAAAGATTGAAACTTTC
TCCATTTTCATCAAATACCCAGAAAAAAGATTTACACTTTCTGCAATTTCATCAAAAACC
CAGAAAAAAATTTGATCTTTTTCAATGGGGGATGAAAGTAAAGGCGAAAGCCAAAGCCAA
AGCCAATCTTTACTGAACAAGAAGAGTATATTATATGCACGTAGTACATCACATGCTTAC
GATGAATTGCATGTTTTTAGGAGATGGTTGAAGTGGATGTGTGTGGATCAATCTGATACA
TTATCTACTGTTCTGTCTTGGTTTGTTTTTATAATATTTGCAATTGTTGTTCCATGTTTG
TCCCATTTTCTATTGGCTTGTGCAGATTGTGATGCTAATCATGATAGACCTTATGACAAT
GTTGTTCAGTTGTCTCTTAGTGGTGTTGCTGCTCTGTCTTTTATTTGTCTTACTAGGTTT
ATGAAGAAATTTGGGCTTCGTAGGTTCTTGTTTCTTGATAAGCTTTGTGATGAAAGTGAG
ACTGTTAGAAAATGCTATATGGAAGAGCTCAATAGATCGTTGAAGATCCTATTCATATTT
GTCCTGCCATGTTTCGCTGCTGAAAGCATATATAAAATTTGGTGGTACAGTTCAGGTGGA
ACTCAAATCCCCTTTTTAGGCAATGTCATTGTGAGTGACATTGTCGCGTGCCTTCTGGAG
CTGAGCTCATGGCTTTACAGGACGACTGTGTTCTTCCTAGTGTGTGTCCTTTTTCGCTTG
ATTTGTTACCTTCAGATTCTCCGATTGAGAGATTTTTCTCAGATATTCCACATTGATTCT
GATGTTGAGACGGTGTTGAGAGAGCACCTTAGAATCAGGAGGCACTTGCGGATCATTAGC
CATAGGTACCGTAGATTTATCTTGTTGGGATTGGTATTTGTCACAGCAAGTCAATTTGCG
TCCCTTCTCATGACTACACGATCAACTGCTGATCTTCATATCTACAAGAGTGGTGAACTC
GCGCTATGCTCTCTGAGCCTTCTTGCCGGGCTGTTGATACTGTTGAGAGGTGCAGTCAGA
ATTACCCATAAGGCACAAGCTGTTACATGCTTGGCGGCTAAGTGGCACGTGTGTGCAACA
GTTGACTCTTTTGAAGCAGTTGAGGGTGAAACTCCTCCAATATCTCAAATAGCCAGCAAC
CAAGTTTTCCCTGTCACTTCCGAAGGGTCATCTGATGCTGATGATGTTGGAGATGAGGAA
GATGAGTTCGACAACACAAAATTTGTCCACTCATATGCATATAGCACAATTTCATTCCAG
AAAAGGCAGGCACTAGTGACATATTTTGAGCATAACAGAGCAGGAATTACTCTATATGGC
TTTATGCTGGATAGATCCTATCTTCACACTATTTTTGGTATGGAACTAGCACTGGTCCTC
TGGTTGCTTGGAAAAACTGTTGCTTCCATTGCTTGAATCATTGGGTATTGATTTGTTACG
TTCCTCGGACTCTCCAAAAATGATGCCGCACTCGTGTCAGATCCTTCAAAAACATACTAC
TTTAGAGGATTCGACACGCATCCTACGACATTTTCGAAGTGTTTGATCAACTTTTGGTTG
AATTGAGAAGGTTTCTGTTATTGCTTGTGCTATTGTTTAGAGTGTAACATATTACATATT
CAATCAGAAATTAAGATGCTTGTGTGGAATATGTGGGTGAATATGTATAGAGCTATTTTA
TTTATTCAATTTTGTATTATATTATACTGGATCTATAAGAGGTAAAATGATGTTATTTAC
TTGTTA
