Microarray Probes on PGSC0003DMT400057320
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_15002_PI426222305 |
JHI_St_60k_v1 |
CTAAGTCTCTCTTTTCCAGTTACTCAGAGTTTTTAACTTTAGAGAGCAGTGTCTGATTAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400057320
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400057320 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G55740.1 |
+1 |
0.0 |
1144 |
544/756 (72%) |
seed imbibition 1 | chr1:20835507-20838707 REVERSE LENGTH=754 |
Transcript Sequence (2658 bp)
>PGSC0003DMT400057320 2658 pgsc_dm_v3.4
CTTTTCTATTCTCCACTTTTCTCAGCTCCAATTTTTTTATACATTTTTTTCAATTACTAT
ACAAGTTTTGATCTCGTCATTGCTTATTCTTTGTGGGGTTTTTGAGATTTCTTGTTTTTT
TTGGTCTTAGAAAGATAAAGATCATATTATTTTTCATTTGGGTGTTTTCTTGTTTGGGTA
GTTTTGTTGGTTATAGAAAGAAAAAAGATGACAGTAGGAGCAGGAATTTGTGTAGCTGAA
AGGAAGCTTAATGTATTGGGGCAAAGCATTCTAACTGATGTTGATGAAAATATTATTGTT
AGTCAGCCAAATGGTGAAGCTTTCACTAATGGGGCATTTCTTGGTGTTAACTCAGACAGA
GTTGGTAGTCATAGGGTCTTCCCTATTGGCAAACTACAAGGATTGAGATTTATGTGTGGT
TTCCGGTTCAAGTTATGGTGGATGACACAGAGAATGGGTACATCTGGCCAAGATATACCA
TTTGAGACTCAGTTTTTGATTGTGGAAGGAAATGATGGTTCAAATTTTGATCAAGACAAC
CAGCAAAATTCAGCATTGTATGTTGTTTTCTTGCCTATTCTAGAGGGAGATTTTAGGGCT
GTTCTTCAAGGGAATTCAAACGACGAGTTAGAGATATGTCTGGAAAGTGGAGATCCTGCT
GTGCAAGATTTCGAGGGAAGCCATTTGGTTTATGTAGCAGCTGGACCAGACCCTTTTGAT
GTCATTACTAATGCTGTCAAGACGGTGGAGAGGCAATTACAGACATTTTGTCACCGTGAT
AGAAAGAAGATGCCAGACATGTTGAACTGGTTCGGATGGTGCACGTGGGATGCTTTCTAT
ACAACCGTTTCTTCAGAGGGAGTGAAGCAAGGACTAGAGAGTTTGGAGAAAGGAGGTATT
CCCCCAAAGTTTGTACTCATTGATGATGGATGGCAATCAGTGAGTATGGATCCCAATGGC
ATCGAATCCATTGCTGATAACCATGCAAACTTTGCAAACAGGCTAACTCATATCAAAGAG
AACCATAAGTTTCAGAAAAATGGAAAGGAAGGTCATAGGGTTAACGATCCTGCAATGGGA
CTTCGACATGTTGTTACCAATATCAAAGACCAACACAATTTGAAGTATGTGTACATGTGG
CATGCACTTGCTGGTTACTGGGGTGGTGTGAGACCCGGGGTCCCTGGGATGGAACACTAC
GAATCCAAGTTATCTTTCCCAGTTTCATCTCCCGGGACTGAGTCACAGGAACCTGATGAT
GCTTTGAGCAGCTTGATAAAGAACGGTCTTGGTCTAGTGAACCCTGAGAAAGTTTTATAC
TTCTATAATGAACTGCACTCATACCTTGCTTCTGCGGGTATAGATGGGGTTAAAGTAGAT
GTTCAGAACATCCTTGAAACACTTGGAGCTGGTCATGGTGGAAGAGTAAAACTCGCAAGA
AAGTATCATCAAGCATTAGAGGCATCTATTGCTCGAAATTTTCCTGATAATGGAATTATT
TCATGCATGAGCCATAGTAATGATAGTTTGTTCAGTGCAAAGCGTTCAGCTGTTATAAGA
GCATCAGATGATTTCTGGCCACGAGACCCTGCATCACACACAATTCACATAGCATCAGTG
GCGTACAACACCATTTTCCTTGGTGAATTCATGCAGCCTGATTGGGATATGTTTCATAGT
GTGCATCCCATGGCTGAATACCACGGAGCAGCACGAGCAGTTGGAGGCTGTGCTATTTAT
GTCAGTGACAAGCCTGGACAGCACGACTTTAATCTTCTAAAGAAGCTTGTACTTCCAGAT
GGTTCCATATTACGCGCCAAACTTCCAGGAAGGCCAACTAGAGACTGCTTGTTTTCTGAT
CCAGCAAGAGACGGGATAAGTCTTTTGAAGATTTGGAATCTCAACGATTTCAACGGAGTA
ATCGGTGTATTCAACTGTCAAGGTGCTGGATGGTGTAAGGTTGGCAAGAAGAATCTAATC
CACGATTGTCAACCAGGGACGATAACTGGGATTGTTCGCGCTATTGATGTCAATTACTTA
CCAAGGATTGCTCATGATGGATGGACTGGCGATGCCATTCTGTATTCTCATCTTCATAGG
GAATTGATCAATCTTCCTAAAAATGCTTCGATTCCAATCACTCTAAACGCGAGAGAATAT
GAAGTCTTTACAGTTGTTCCAATCAATGAAATGTCTACAGGATCAAGATTTGCTCCGATT
GGTCTTGTGAATATGTTCAATTCAGGAGGAGCAATCAAAGAGCTGAAGTATGAAACAGAG
GGAAAATGTGGATTAGTTTCCATGAAGGTTCGCGGATGTGGAATGTTTGGTGCTTATTCA
TCTGGGAAGCCTAAACGAATACAAGTTGACAATGAAGAAGTACATTTTGATTACGACGAA
TCCTCTGGATTAATCACCATTAATATTAGAGTTCCTGATGAAGAATTATACCTTTGGGAT
GTAAAAGTTGAAATGTGAAAAGTGCAAGATGATCATAAATGGATGAATTGAAGACTTGTG
AACTAAGTCTCTCTTTTCCAGTTACTCAGAGTTTTTAACTTTAGAGAGCAGTGTCTGATT
ATTATTTAAATTTTGTTACATCATAAGGTAACATGGCGAAAACTCTCATTTTATATGATA
ACTGATTTTGGTCTGATC
