Microarray Probes on PGSC0003DMT400057318
Probe ID | Chip | Probe Sequence |
---|
CUST_15026_PI426222305 |
JHI_St_60k_v1 |
CTAAGTCTCTCTTTTCCAGTTACTCAGAGTTTTTAACTTTAGAGAGCAGTGTCTGATTAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400057318
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400057318 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT1G55740.1 |
+3 |
2e-106 |
332 |
157/244 (64%) |
seed imbibition 1 | chr1:20835507-20838707 REVERSE LENGTH=754 |
Transcript Sequence (1082 bp)
>PGSC0003DMT400057318 1082 pgsc_dm_v3.4
ATGTTAGAGTGTGCATCCCATGGCTGAATACCACGGAGCAGCACGAGCAGTTGGAGGCTG
TGCTATTTATGTCAGGTACTGCTTATATATACCTTAAAAACAGCTAGTTATCTGGTTTAT
GATCCAATTTTCGTTAATATTTTCTCATCGCTGCCTATTTGCAATGTAGTGACAAGCCTG
GACAGCACGACTTTAATCTTCTAAAGAAGCTTGTACTTCCAGATGGTTCCATATTACGCG
CCAAACTTCCAGGAAGGCCAACTAGAGACTGCTTGTTTTCTGATCCAGCAAGAGACGGGA
TAAGTCTTTTGAAGATTTGGAATCTCAACGATTTCAACGGAGTAATCGGTGTATTCAACT
GTCAAGGTGCTGGATGGTGTAAGGTTGGCAAGAAGAATCTAATCCACGATTGTCAACCAG
GGACGATAACTGGGATTGTTCGCGCTATTGATGTCAATTACTTACCAAGGATTGCTCATG
ATGGATGGACTGGCGATGCCATTCTGTATTCTCATCTTCATAGGGAATTGATCAATCTTC
CTAAAAATGCTTCGATTCCAATCACTCTAAACGCGAGAGAATATGAAGTCTTTACAGTTG
TTCCAATCAATGAAATGTCTACAGGATCAAGATTTGCTCCGATTGGTCTTGTGAATATGT
TCAATTCAGGAGGAGCAATCAAAGAGCTGAAGTATGAAACAGAGGGAAAATGTGGATTAG
TTTCCATGAAGGTTCGCGGATGTGGAATGTTTGGTGCTTATTCATCTGGGAAGCCTAAAC
GAATACAAGTTGACAATGAAGAAGTACATTTTGATTACGACGAATCCTCTGGATTAATCA
CCATTAATATTAGAGTTCCTGATGAAGAATTATACCTTTGGGATGTAAAAGTTGAAATGT
GAAAAGTGCAAGATGATCATAAATGGATGAATTGAAGACTTGTGAACTAAGTCTCTCTTT
TCCAGTTACTCAGAGTTTTTAACTTTAGAGAGCAGTGTCTGATTATTATTTAAATTTTGT
TACATCATAAGGTAACATGGCGAAAACTCTCATTTTATATGATAACTGATTTTGGTCTGA
TC