Microarray Probes on PGSC0003DMT400056100
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_48826_PI426222305 |
JHI_St_60k_v1 |
GATCATGGGCTTGATAGATTTATGGAGATTTACTTTATGGGTGTGTTTGGTATGAAAGAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400056100
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400056100 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G05050.1 |
+2 |
2e-27 |
108 |
72/147 (49%) |
ubiquitin 11 | chr4:2588271-2588960 REVERSE LENGTH=229 |
Transcript Sequence (1066 bp)
>PGSC0003DMT400056100 1066 pgsc_dm_v3.4
TTTTCTTTTCTATGAATGACACAATGGATACAATTTTTTTATTTTATTTTTAAACAATCA
CCCCCAAATATCCCTTTTTAAGCTTTCCTTCTACAAGTAAAGGGTTTGGGATTGAGCCTG
GACTTCTTTATCTTAGAGTTGAAGGAAGAATATGATGAAAGGCAGATCAAGTGATCAACC
CTCAATGGAAATGGATGTTCAAAAGAATCCATGGTCACGGGATCGAACGATGCGAATAAT
TATTCAAGATGACACTTATAGAGACATGATTAATTGGAAGTCATTACCGGAATCTTTTCT
ACCAAGTGCTATAGATCTCACCAAAGAAGAAGATAAATGTTCAGAATCAAAAGCTTTTCT
CCTAATGGTTGAACCAGATGACAGTATAGCTGCAGTTAAAGCGTATATTCAAGAGGAAAA
AGGGATTTCTTTTAAAAAACAAAAATTGTTGAATGAAGATGGAGGAGTTATGAGAGATGC
ACAGACTCTTACGTTAGCGGGAATCAATAAAGGATCTACCTTAATTCTTCGATATGCACC
AATAACACAAATTTATGTGTTAACGCTTACTAATCGCAGGTTTAAGTTAATGGTTGAGAG
TGATGACACGATTGCAGATGTTAAAGCTGCCATTCAGGAAAAAGAAGGTATCCGATTTCA
TAAACAGAGGCTAATCTATAATGGACGACAACTCGAAGATGATAGATCTCTCGTAGACTA
TGGAATTCAATATAACAGTCAGCTGGCACTTGTCTTGAGGTTGTGCGGTTGTTGAATATT
AGCCGGTAAAGGATATGGTTGCTTTCTAATTTGCATAATCTATATGACTTGTTATTTCCG
TTGGTTTAGATCTATCTACTATGATCCATGTTAAATGGTGTTATGTTCCCTTTTGCCTCT
ATTATTTTGTGCTCAATTTTATTTTTTCCTCCATTTTAAATGGTGTAATATCCTTGGTTG
GAGGCGAGGATCATGGGCTTGATAGATTTATGGAGATTTACTTTATGGGTGTGTTTGGTA
TGAAAGAAAAAATGTAATGTTTTATGGAAAATAAGTGAATTTTTTG
