Microarray Probes on PGSC0003DMT400056052
Probe ID | Chip | Probe Sequence |
---|
CUST_9797_PI426222305 |
JHI_St_60k_v1 |
TTGGTGTCAAACAAGTTCCCTGCGGTCACTTATTCCACTCATGTTGCCTTACAAATTGGC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400056052
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400056052 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT3G19950.1 |
+1 |
8e-12 |
63 |
24/42 (57%) |
RING/U-box superfamily protein | chr3:6942853-6943839 FORWARD LENGTH=328 |
Transcript Sequence (602 bp)
>PGSC0003DMT400056052 602 pgsc_dm_v3.4
GTTGATTAACGTCCTCTATTAGTCAAACCTACAAATGGACGTGAATATCACTAAAGTCCA
AAGTGAAAAATATTTTTATTTATCTAACCCTTTCCTCTTTCCACGAAGCGACCGATCCCC
CAATTGAATATATATAAATACAGCTAGCAAGCAATTCGTTGATATAATCACAATCTATAG
AGTCTGAAGATGGATGAAGTTTTCGATCTCGATCTTGCTTTAACGGTGGTGGAAGATTTC
AATGCAGCGGCGGCTTATCAACTGGAGGAGCCTTCGCCAATTTCTGATGATGAAGACGAC
GAGATGATGCCGATGGTTAATGCAGTTGGCTTTTGTTCAATCTGTATGGAAGAGTTTGAA
GCAGAAGTTGGTGTCAAACAAGTTCCCTGCGGTCACTTATTCCACTCATGTTGCCTTACA
AATTGGCTCTCCCTCCGCAAATCATGTCCTCTTTGCCGCTTCTCTTTCTCTACTTCATGA
ATTTTTTTTTTATATTTTTTTTTTTATGAATATGATTTTAGTTTATACACACTCTTATGA
GTATTTACAATACAATATTGTTAGGGTAAAAGTTGAGTATCTCCTTCTGTCACATTTCAG
AT