Microarray Probes on PGSC0003DMT400055930
Probe ID | Chip | Probe Sequence |
---|
CUST_48226_PI426222305 |
JHI_St_60k_v1 |
ATGTTCTAGTGCCTAAATGGCCGAAAGTTCACCAAATCTTTGAAAGATTGAGGATCTGCG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400055930
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400055930 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT4G21320.1 |
+1 |
8e-146 |
421 |
195/284 (69%) |
Aldolase-type TIM barrel family protein | chr4:11340492-11341732 FORWARD LENGTH=286 |
Transcript Sequence (1320 bp)
>PGSC0003DMT400055930 1320 pgsc_dm_v3.4
GGCTAGTGTTGGTTCTAGAAACCGCTGAAAGCTTCTTCAAATCATAATAATCGAAATTCA
AATGAACACAAAAAAATTTCAAGTCTTCCCAAACAAAATTGATAAATCATTCTTCTGAGC
ATTTGTATCCCTCTCCCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGAAGGAGGAGG
CAAAAAATGGCAGCGTACAGGTGGAAGAGTTTCAACGATGATGGAGATCGTCCAGAGAAA
CCTCGTCGCTATGGCGTTACAGAAATGAAGGGTCCCAACTATTCCCTTTTCTCGAGAGGC
CTTCTTGAGGATGTTTTTGAGTCTATGGGTCAGTTTGTTGATGGGCTAAAACTATGTGAT
GGATCCCATACTGTGATGCCAAAGAATTACATCAAAGAAGTGACTGACATGGCACATAAA
CACAATGTTTATGTTAACTCTGGTGATTGGGCAGATCAAATGCTTCGCCGAGGTCCTTCT
TCTCTTAAAGAATATATTGAGGAATGTAAGCAATTGGGGTTTGATTCAATTGAGCTTGAT
GTTGCATCACTTGGTCTACCTGAGGAGACCCTCTTGAGATATGTGAGGCTGATTAAGAGC
AGTGGGCTCAGAGCTAAGCCTCAGTTCTCTGTTAAGTTTAACAAGTCTGATATAGCCTTC
GCCGGTGACAGAGCTTTTGGGGCTTACGTGATTCCGGCACCTCAAACCTCTGAGATGGTT
GAAGATGTGGATCTTTTGGTCAGAAGGGCAGAGAGATGCTTAGAAGCTGGGGCAGACATG
ATAATGATCAATGCTGATGATTTATGTAGGCAGGCTGGTTTACTAAGATCAGATATTGTT
GCGAAGATTGTGGGTCGTCTTGGACTTGAGAAAACTATGTTTGAGGCATCAAATCCTAAA
ATCTCTGAGTGGTTTGTCAAACGTTATGGTCCAAAGGTTAATCTTATCGTGGACCACTCA
CAAGTAATGGATCTGGAATGCCTCAGAGGACGTAACCTGGGTCAAAATCACTCATCTGTA
CTTGGCAGGTCATATTTTCTGCTCTGATCTTGCGGTGTCCATAGAGAAAAATGTGCTCAT
TGTAGCAAACAACTTATCTCTGTAAAATGCTTTGCTGGTCATGTTCAGATCATGTTTAAA
CTTTTAAATGAAAAAAAAGGAGAGTGTTTCATATATGTACTCATGTACTGTAAGGATTTC
AGTCTTTTTAGAGACTTGTTTTCTTGCTTGAAGTTCAGCTGCTTGGTAAGATGTTCTTTT
ATGTTCTAGTGCCTAAATGGCCGAAAGTTCACCAAATCTTTGAAAGATTGAGGATCTGCG