Microarray Probes on PGSC0003DMT400055239
Probe ID | Chip | Probe Sequence |
---|
CUST_44148_PI426222305 |
JHI_St_60k_v1 |
ATTAGTGGATTTGTTTGGAGTGGATATGGAATCAAGAAAGGTACCTTTGGCTTCTTTTTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400055239
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400055239 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT4G37650.1 |
+3 |
0.0 |
555 |
297/480 (62%) |
GRAS family transcription factor | chr4:17691871-17693466 FORWARD LENGTH=531 |
Transcript Sequence (1984 bp)
>PGSC0003DMT400055239 1984 pgsc_dm_v3.4
CTTGTTCTCTCTTTCTTTAATTATTTATGTAAATAGGCGTCAAGCTTTTAATTCCTCCCC
ACTCTTTCCTCCAACAACTCCACTTGAGTTGATCCTTTTGCTTTGAACCCATCCAACAAA
ATCACTAAAGGTACTACTAGTCTTGTACATTTATTCTTTTTAACTTTGATGTGGCAAGAG
AGATACGTACCCCCCCCTTTTGTTAAATGGATACTTTGTTTAGATTAGTTACCCTTCAAC
AACAACAACAACAACAACAATCTGATCAATACTCTTTTAACTCCAGCAGAACTTCAAGCA
GCTCTAGATCTTCTAACAAACAAAATACTACTTATAATTATCATCCACATAATAATAATC
AAGACGAAGAATGCTTCAACTTTTTCATGGATGAAGATGATTTCTCTTCTTCTTCTTCTA
AACACAACACCAACTATCCTCCTCCTCATTACAATCAATATCAACAAATTTCCAACACTC
CCACACCGACAACTACAAGCAGTACCCCGACACATCAATCTCAATCTCAATCTCATCATC
ACTATGATCATCAGTTCTCCCCAGCACGTGACTTAAATCTCGAATTCGCTTCCTCATTTT
CTGGAAAATGGGCGACGGACATTCTTCTAGAAACTTCTCGTGCCATAGCCGATAAGAACA
GTACACGTGTCCAACAACTCATGTGGATGTTGAATGAGCTGAGTTCTCCATATGGAGATA
CCGAACAAAAATTGGCTTCTTATTTTCTTCAAGCATTATTTAGCCGTATGACGGATTCTG
GCGAACGATGTTATCGTACGTTGTTATCCGCTTCGGATAAAACATGTTCGTTCGAGTCAA
CGAGGAAATTAGTTTTGAAATTTCAGGAAGTTAGCCCTTGGACGACTTTTGGTCACGTTG
CATCCAATGGTGCAATTATGGAAGCGTTAGAAGGTGAGTCAAAGTTGCATATAATTGATA
TTAGCAACACTTATTGTACTCAATGGCCTACTTTACTAGAAGCACTAGCAACCCGCACCG
ACGAAACACCGCATCTCCGCCTCACCACGGTGGTTGCCGCTAGCAGAGGTGCAGCGTCGG
TGCAAAAAGTGATGAAGGAGATTGGTAGTAGAATGGAAAAATTCGCTAGGCTTATGGGCG
TACCGTTTAAATTCAACGTGATTCACCATGCGGGAAATTTATCTGAGTTGGATATTGGTG
CGTTAGATATTAAAGAAGATGAAGCGCTAGCAATTAATTGTATTGGTGCGTTACATTCGG
TTACGCCAGCTGGCAATCGAAGGGATTATTTGATATCATTGTTTAGGAGGTTACAACCTA
GGATTGTTACAATTGTTGAAGAAGAAGCTGATCTTGATGTTGGTGTTGATGGTTTCGATT
TTGTTAAAGGTTTTCAAGAATGTTTGAAATGGCTTAGGGTTTATTTTGAATCATTAGACG
AGAGTTTTTCGAAAACAAGTAACGAACGTTTGATGCTAGAGAGACAAGCAGGACGTTCGA
TTGTTGATTTACTAGCATGCCCACCATCGGAGTCAATGGAGAGGCGGGAAACGGGGGCAA
AATGGTCACATCGTATGCATGCAGGAGGGTTCAGTCAGCTTTTATATAGTGATGAAGTTT
GTGATGATGTTAGAGCTTTGTTGAGAAGGTATAAAGATGGGTGGTCGATGGGACAGTGTG
GCGGAGATTCCGCCGGAATATTCTTGTCGTGGAAGGAACAGCCGGTGGTGTGGGCCAGTG
CATGGAAGCCTTAAAATTAAATTAGGACCAATTGGTGGTGTGGGTGGTGAGTCACCATCG
AGATCTCCCTATTTGCTCTCACTTTAATTAGTGGATTTGTTTGGAGTGGATATGGAATCA
AGAAAGGTACCTTTGGCTTCTTTTTTTTTTGTTTAAATTTTAAATGATGAATAGAATTTT
TGAGTTTTTAATTAGTAGTAACATACTAATTCTATCGGATATGATGATTAACCTTTTGTT
AACA