Microarray Probes on PGSC0003DMT400055214
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_44096_PI426222305 |
JHI_St_60k_v1 |
GGCTATCATTATGGTGTAAATGACACAATCGTGCAATGTTTGGCTTATTAGTTAAATGGA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400055214
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400055214 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G22850.1 |
+3 |
3e-32 |
122 |
85/216 (39%) |
basic leucine-zipper 6 | chr2:9732601-9733284 REVERSE LENGTH=227 |
Transcript Sequence (1060 bp)
>PGSC0003DMT400055214 1060 pgsc_dm_v3.4
CACTCCTGACCTTACTACTTCCCTTTTCTCCTCCTAATTACCCACCCCCCTTTAGAAGCG
ATTTTCCGGCCATGTTGTCCACTTTTCCGGCCACTACTCTGTCCACTGATGGCCTTTTTC
CCTATTTATTTCCGGCTTTTGATGGCGGGTTCACTCCTTGGGAATGTATCGAACCGGCTT
TTCTATTCCCACAAGAAGTGGAAGAAGAAGAACCGGTTGTTTCACCCAAGGAATCCCCAC
CCCCTGAACCGGTTATTTTAAACTCCGATTCAGGTTCTGATGACTCCAAACCGAATTCTG
TTCACTCTAGTTCCGGTTCAGATGACCCGAACCGGAATAATAACAATAATAATAACACGA
ACCGCTGTCCTGACGAGAGGAAGCGGCAGCGCACGACATCGAACCGTGACATAGATGAGA
GGAAGCGTCGACGTATGGTATCGAACCGGGAATCAGCGAGGCGGTCCCGCATGCGAAAGC
AAAAGCATCTGGAGAACCTGCGGAACCAAGCGAACAGGCTTAAAGTAGGGAACCGGGAAA
TAATGAACCGGTTACGGTTAATTACTTACCGGTGCCAAGTGGTCCAGTGTGAGAACGAGC
GGGTCAGGACCGAATCGGCTATCCTTCGGCAAAGACTTGAGGGTATACGTCAAATATTGA
TCACCCGGCAACTTGAGCAGCAATTTAATTCTTATTCTGCATGGGCATGCAATAATATGG
AACAAAGACCTCATTAATTAATCACTTGGACCTATAATAAATCATCATTAAACGTGCTTC
TTCCTCTAATTAGCACCACTATATAACTATCAGATGAAATGAAGTCACAAGAGGATTTTC
TCTCCCTCTCTCTCTATTTCTTGTAAATTAAATTAAAAGGTGCGTATAATAGCGGTAAAG
AGATATAGTAATGTATGTAATGTAGCTACTAGCTAGGAGCTTTGAGGTTGGGACCAAATG
GTGGTTTTATTTTAAGCAAAACCAGGCTATCATTATGGTGTAAATGACACAATCGTGCAA
TGTTTGGCTTATTAGTTAAATGGAACTATTTCCTTTTTGC
