Microarray Probes on PGSC0003DMT400055199

Probe IDChipProbe Sequence
CUST_44129_PI426222305 JHI_St_60k_v1 AGAAGAGCCAGAACAAAACTGAAGCAAACAGAGGTAGACTGTGAATTCCTGAAAAAATGC

Link to Spud DB Genome Browser for Transcript PGSC0003DMT400055199

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Source Transcript PGSC0003DMT400055199 - Homology to Model Species (BLASTX to E-value < 1e-50)

DatabaseLink to BLAST HitFrameE-valueScore% IdentityDescription
Tomato (ITAG)None-----
TAIR PP10 AT4G37790.1 +1 2e-87 270 173/287 (60%) Homeobox-leucine zipper protein family | chr4:17768241-17769272 FORWARD LENGTH=278

Transcript Sequence (1186 bp)

>PGSC0003DMT400055199 1186 pgsc_dm_v3.4
CTCTCCCAAAGCTACGCCTAATTAGCTAAAGTCCCCAACTCTCTCTTCATATATATCCCA
CCATCCCTTTTCTCTTTTCCACCATTCTTCCTCACAACAACAAAAGTTCACACACACACT
TGCTTCCTTTTTTTCGTTTTCTTTTATTCTAACACATAGATGGGTTTTGATGATATTTGC
AACACTGGCCTAGTTTTAGGATTAGGCTTTTCCTCAACAGCCGATTACAAATCAAAGAAA
ATAACAACACCACTAGTAGGCAAAGGTCCGTCTCTTGGCCTTGAACCTTCACTAACTTTA
AGCCTGATTTCCGGTGATCGTACGTACGAACAACAGCCGATTAAAATTAGCAAAGATCAT
CAATCTGCTGATTTGTACAGACAAGATAGTGCTGCCTCTTCCTACTCAAATGCTAGTGTC
AAAAGGGAGAGAGATGTTGGTAGTGAAGAGACAACCACAGAAGTAGAAAGAGTTTCCTCC
AGAGTTATTAGTGATGAAGATGATGATGGCTCTAACGCTAGGAAGAAACTTAGGCTCACT
AAAGCACAATCCGCACTTTTGGAAGAAAGCTTCAAGATACACAGCACTCTCAATCCTAAA
CAAAAACAGGATTTAGCCAGAGAACTCAATTTAAGGCCTCGTCAAGTTGAAGTTTGGTTC
CAGAACAGAAGAGCCAGAACAAAACTGAAGCAAACAGAGGTAGACTGTGAATTCCTGAAA
AAATGCTGCGAGACACTGACAGAAGAAAACAGGAGACTTCACAAGGAATTGCACGAACTA
AAGGCTCTAAAAATAGCACAACCTTTGTACATGCAGTTGCCGGCGGCAACCTTAACCATG
TGTCCTTCATGCGAAAGGATCGGCGGCGGTGTCGGAGAAAATCCGTCGAAAAATGCTTTT
ACCATTGCTCAAAAACCTCACTTCTACAGTCCATTCAACAATCCGTCGGCAGCTTGTTAA
TTAAAGGCCATATATATTAGTAATATAAATCTTGTTTAGAAAAAATCTCGGAAAGCCGCC
ACTTTTTTTGGTTAGGGCTTGTATGACTAGTGCAGTTGTATTTGTAGAGTAATTAGAATT
AAGGTCACTAATCAATATTTTTAATTTGTTTTCTTTCTTATGGTCCATATTATAAGTCTG
TAAATCATTAAGCAAATATATACATATGGATGAATTATTATTATTA