Microarray Probes on PGSC0003DMT400055045
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_18259_PI426222305 |
JHI_St_60k_v1 |
AAGCTAAGGAAAGAGCTAGAGAAATTCTCAAATTTCATGCTAAGGCATGGAGGAATTCTC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400055045
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400055045 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G52450.1 |
+2 |
3e-84 |
260 |
120/214 (56%) |
plant U-box 22 | chr3:19440943-19442250 REVERSE LENGTH=435 |
Transcript Sequence (664 bp)
>PGSC0003DMT400055045 664 pgsc_dm_v3.4
TGTCATGCAACATGGGAGCTATGAGTCTAGGGCTTACGCGGTTATGCTAATGAAAGACAT
GTTTGAAGTATCCACACCAACTTTACTTTTGAGTTTGAAACAAGAATTCTTCACACAAGT
TGTTCAAGTCTTGAGGGATGAGATCTCTCAAAAGGCTACAAAAGCATCATTGCAAGTGCT
AGTGCACGCGTGTCCATTTGGTAGGAACAGAGTGAAAGCAGCAGAAGCAGGAGCAATTAG
GGTTTTGGTTGATCTTCTGCTCGATTCATCTGAAAAAAGGACTTGTGAATTGATGTTAAT
TTTGTTGGATCAACTTTGTCAGAGTGCAGAAGGGAGAGCTAAGCTATTGAATCATCCTGG
AGGATTAGCCATTGTGTCCAAGAAAATACTTAGGGTTTCTAAAGTAGGGAGTGAAAGGGC
AATCAAGATCTTACATTCAATCTCAAAGTTTTCATCAACACCAAGTGTTGTTCAAGAGAT
GTTGAGTTTGGGTGTGGTGGCAAAGCTTTGTTTGATGCTTCAAGTTGATTGTGGAAGTAA
AGCTAAGGAAAGAGCTAGAGAAATTCTCAAATTTCATGCTAAGGCATGGAGGAATTCTCC
TTGTATACCTAATAATTTATTATCTTCATATCCATTTTAGGAATTAGGATGAAAAATATC
AAAA
