Microarray Probes on PGSC0003DMT400055038
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_18352_PI426222305 |
JHI_St_60k_v1 |
AAACTTGCTCCTGATAAAGAGAAATCTGTGGTCACCAGGCTGGCCGGAACTTTTGGATAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400055038
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400055038 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G66150.1 |
+3 |
0.0 |
748 |
438/976 (45%) |
transmembrane kinase 1 | chr1:24631503-24634415 FORWARD LENGTH=942 |
Transcript Sequence (3621 bp)
>PGSC0003DMT400055038 3621 pgsc_dm_v3.4
AGCATTCCTCATATGAAAAATCCACTCTTTATGGTCATTTCTTGCTACTAAATCTTCACT
TATAAAAAAAAAGATTAAATTTTTTGGATTACTCTGTAAAAACTACTGTGTTGTCAGCAA
GAACAACACCATAGTAGTAGCAACTAGCAAGCATTGTGCTTTTTCTCACTCCAATTATCA
CTCTCTTTCTCCTTTTTTGTTTTGGGGTTTAGTGATCTGAACCCCATGTTTTCCACCTCT
TATTGTCTCAAGATTTGACATGGGGGTCTTCAAGAATCAACCTCATTAGGTGGCAAAGAT
TGTAGCTTTCTTGATTTTTGTTGTAGTGGGGTTTTTCTTTGTTGAATGTTAATGCAAATG
CTCAAATGTTGTTGCTTTGTGGATCATCTATGGAGGTTTTTTTTCACCACATATGGTTTG
TTGTAGCTCTGTTTCTTGCTTTTGCTTCACTTGTTTTCACTGTCACTGACCCTAATGACT
TGTCTGTTATCAATGAGTTTAGAAAAGGGTTGGAAAATCCTGAGGTCTTGAAATGGCCTG
AAAATGGTGGAGACCCTTGTGGTTCTCCAGTTTGGCCACATATTGTGTGTAGTGGTAGTA
GAATTCAACAGATTCAAGTTATGGGGTTAGGGTTAAAAGGCCCTTTACCTCAAAACTTGA
ATAAGTTGTCTAGGTTGACACATTTGGGGTTGCAAAAGAATCAATTTAGTGGAAAGTTGC
CATCTTTTAGTGGTTTGTCTGAATTGAGCTTTGCTTACTTGGATTTCAATCAGTTTGACA
CAATCCCATTAGATTTCTTTGATGGACTTGTGAATCTACAAGTTTTGGCTTTGGATGAAA
ATCCTCTAAATGCCACTAGTGGTTGGTCATTGCCAAATGGGCTTCAAGATTCAGCTCAGT
TGATCAATTTAACAATGATAAACTGCAATTTAGCTGGTCCTTTGCCTGAATTTCTTGGAA
CTATGTCTTCTTTAGAGGTTTTGTTGTTGTCTACAAATAGGCTTTCAGGGCCTATTCCAG
GTACTTTCAAGGATGCAGTGCTGAAGATGCTTTGGTTGAACGATCAGTCGGGTGATGGTA
TGAGTGGTTCAATAGATGTTGTTGCAACAATGGTGTCACTTACACATCTTTGGCTTCATG
GGAACCAATTTTCAGGTAAAATCCCAGTAGAGATTGGTAATCTAACAAATCTGAAGGATC
TCAATGTGAATACAAATAACCTTGTTGGATTAATCCCTGAAAGTTTAGCAAATATGCCAT
TAGACAATCTTGATTTGAATAATAATCATTTTATGGGACCAGTTCCTAAGTTCAAGGCTA
CTATTGTTAGTTTTATGTCCAATTCTTTTTGTCAAACCAAACAAGGAGCAGTATGTGCCC
CTGAGGTTATGGCACTTTTAGAGTTTCTTGATGGTGTGAATTATCCTTCTAGGCTTGTTG
AATCATGGTCTGGAAACAACCCTTGCGATGGACGTTGGTGGGGAATAAGCTGTGACGATA
ACCAAAAAGTTAGTGTCATAAACTTGCCTAAGTCTAATCTTTCCGGGACCTTGAGTCCTT
CAATCGCGAACCTTGAATCCGTTACTCGCATTTATCTTGAATCAAATAATCTTTCTGGTT
TTGTTCCATCTAGTTGGACTAGTTTGAAATCTCTGTCTATTCTTGATTTGAGTAATAACA
ATATTTCTCCACCTCTACCTAAATTTACCACCCCTTTGAAACTTGTTCTAAATGGAAATC
CAAAGCTGACTTCTAGTCCTCCTGGAGCAAATCCTTCACCAAACAACAACACAACGCCTG
CAGCATCACCTGCGTCGTCTGTACCATCTTCACGACCCAACAGTTCAAGCTCTGTGATCT
TTAAACCCGGTGAACAGTCACCCGAAAAAAAGGACTCAAAGTCAAAGATAGCCATAGTTG
TGGTTCCTATTGCTGGTTTTCTACTTTTGATTTTTCTTGCTATTCCACTGTACATTTATG
TCTGTAAGAGGAGTAAAGATAACCATCAAGCTCCAACTGCTCTTGTGGTTCATCCTAGAG
ATCCATCTGATTCGGATAATGTGGTCAAGATTGCGATCGCCAATCAGACTAATAGAAGTC
TTTCCACAGTAAATGCAAGTGGTTCTGCTAGCATACACAGTGGTGAATCCCATATGATTG
AAGCTGGGAATTTGCTCATATCGGTTCAAGTACTTCGGAATGTGACTAAGAATTTTTCTC
CGGAAAATGAACTTGGGCGTGGTGGTTTTGGTGTGGTTTATAAGGGAGAATTAGATGATG
GGACACAAATAGCTGTCAAAAGAATGGAGGCTGGTATTGTTAGCAACAAAGCTTTGGATG
AATTTCGATCTGAAATTGATGTTCTCTCAAAAGTACGGCATCGACATTTAGTGTCTCTAC
TGGGATACTCTGTTGAAGGTAGTGAAAGAATTCTGGTTTATGAGTACATGCCACAAGGTG
CACTTAGTAGACATCTTTTCCGCTGGAAAAAGTTCAAGTTGGAGCCTCTCTCTTGGAAGA
AAAGGCTTAATATTGCCTTAGATGTTGCTAGAGGTGTGGAGTATCTACACACACTAGCAC
ATCAGAGTTTCATTCATAGAGATCTCAAATCCTCAAATATCTTGCTGGGTGATGATTTCC
GAGCAAAAGTATCCGACTTTGGACTCGTGAAACTTGCTCCTGATAAAGAGAAATCTGTGG
TCACCAGGCTGGCCGGAACTTTTGGATATCTGGCACCTGAATATGCTGTTACGGGTAAAA
TCACCACGAAAGCTGATGTCTTTAGCTTTGGTGTTGTGCTAATGGAGTTGTTAACTGGGA
TGATGGCACTAGATGAGGATAGACCTGAGGAAAGCCAGTACTTGGTTTCGTGGTTCTGGA
ATGCCAAATCCTCTAAAGAGAAGCTTATGACAGTCATTGATCCAGCTCTAGACGTGAAAG
ATGAGATAACCAAGAGCATTTCCACCTTAGCTGAACTTGCTGGTCATTGCACTGCAAGAG
AACCTGGTCAACGGCCAGATATGGGCCACGCTGTAAACGTGCTCTCCCCACTTGTTGAGA
AATGGAAGCCTCTTGAGGATGATCCAGAGGACTATTGTGGTATCGACTACAGTCTTCCCC
TCAATCAAATGGTCAAGGGCTGGCAAGAATCGGAAGGAAAAGACTTAAGTTACGTGGACC
TCGAGGACAGTAAGGGTAGTATCCCTGCAAGACCAACTGGATTTGCAGATTCATTTACAT
CAGCTGATGGTAGATAATGGAGGTACTTCTATGTAGTAGATGTAGATATCAATTTTCTTT
GTATTGTGTGAGATTTTGATCGTATTTTCCACGTGCCTTCGTTCATTTCTCCCCCTTCAA
TGTGAATGTATTAGATATTCAAACTATGTGTAGCCTCAGTTCCTTCTGTAGATACAAAAT
AGTGATGAAGGAGAACTATACATCGGTTAAACTCCTCGCTCAGTCACTATTTTCATCTTC
TATATACTATTGTGAGATTTAAGAGCATTTCTTACAACTTTGCTTATTTTCGTCGTCTAG
TTTGCTGCTTCAGAAGTTCTGTGTTGAGAAACATACTGATGTTGAGATAGCCTTGTAATA
GAATATGTCGCTTGATTCGAT
