Microarray Probes on PGSC0003DMT400054947
Probe ID | Chip | Probe Sequence |
---|
CUST_18193_PI426222305 |
JHI_St_60k_v1 |
CTAAGGAAAGAGCTAGAGAAATTCTCAAATTTCATGCAAAGGCATGGATGAATTCTCCTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400054947
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400054947 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT2G35930.1 |
+2 |
1e-126 |
307 |
156/304 (51%) |
plant U-box 23 | chr2:15083101-15084336 REVERSE LENGTH=411 |
Transcript Sequence (1402 bp)
>PGSC0003DMT400054947 1402 pgsc_dm_v3.4
CTCATCTAAAGTCTCAACAAAACTTCATCTACTAAAAAATATTCCTCTTTTTTTTTTTTG
GACATATTTGCAACTTTCTTATAAGATTGATCTCCTTCTTTGATTAATCTTGAAATTTCC
CAAAATATACAAATGGAAGAAATTCAAGTACCTCCTTATTTTATTTGTCCAATTTCTCTA
GAGATGATGAAAGATCCTGTCACGATCTCAACTGGAATAACATATGATCGAGAAAACATC
GAAAAATGGATATTCTCAGCAAAGAACAACTCTTGTCCGGCTACGAAACAGTCTCTTACA
TGCATAGAGTTGACCCCAAATGTTACTCTTCGACGATTAATCCAATCGTGGTGTACTATC
AATTCGTCCCATGGTATTGAAAGGTTCCCTACACCAAAGCCTCCGGTTAGCAAACCACAA
ATAATAAAGCTCCTAAAAGAAAGCAAAATCGCCTAAGATGCAAATGAATTCTCTCAAGAG
ACTCAGATCCATAGCTTCTGAGAATGATGCTAACAAACGTTGCATGGAATCCGCGGGGGC
AATGGAGTTCTTAGCTTCTATTATTAATAATAATAATAATTCGAATGAAGTGTTTGAAGA
AGAAGAGGGTTTCATGAGTACTAAAGATGAAGCGCTTAGCATCCTCTATCAACTCAAATT
ATCTGAAAATGGATTGAGGTCACTCATCATGAGTGGAAATGGAGAATTCATTGAGTCATT
GACACGTGTCATGCAACATGGGAGCTACGAGTCTAGGGCTTACGCGGTTATGCTAATGAA
AGACATGTTCGAAGTATCCACACCAACTCTACTTTTGAGTTTGAAGCAAGAATTCTTCAT
ACAAGTTGTTCAAGTCTTGAGGGATGAGATCTCTCAAAAGGCAATGAAAGCATCCTTGCA
AGTGTTAGTGAACGCGTGTCCATTTGGGAGGAACAAAGTGAAAGCAGCAGAAGCAGGAGC
AATTAGGGTTTTGGTTGATCTTCTGCTCGATTCATCTGAGAAAAGGGTTTGTGAATTTAT
CCTAGTTTTGTTGGATCAAATTTGTCAGAGCGCAGAAGGGAGAGCCGAGCTATTGAATCA
TCCTGGAGGATTAGCCATTGTCTCCAAGAAAATACTTAGGGTTTCTAAAGTGGGGAGTGA
AAGGGCAATCAAGATCTTACATTCAATCTCAAAGTTTTCATCAACACCAAGTGTTGTTCA
AGAGATGTTGAGTTTGGGTGTGGTGGCAAAGCTTTGTTTGGTTCTTCAAGTTGATTGTGG
AAGTAAAGCTAAGGAAAGAGCTAGAGAAATTCTCAAATTTCATGCAAAGGCATGGATGAA
TTCTCCTTGTATACCTAATAATTTATTATCTTCATATCCATTTTAGGAATTAGGATAAAA
AGAACAAACAATTGTTAGATAG