Microarray Probes on PGSC0003DMT400054698
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_38152_PI426222305 |
JHI_St_60k_v1 |
ATTCAGTTTAGGTTTTCTGCGACACGGTAAATCCGTAACCATAATTTATTCGACTTCAAC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400054698
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400054698 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G08750.1 |
+1 |
2e-49 |
170 |
92/166 (55%) |
Peptidase C13 family | chr1:2801283-2804392 FORWARD LENGTH=388 |
Transcript Sequence (854 bp)
>PGSC0003DMT400054698 854 pgsc_dm_v3.4
GTTGGCGTCTCAGTTATTGATCGATTCACATTTTATACTCTTGCATTTTTTGAGAGGGTG
AACATGTATGATAATGCCTCATTGGGCAGTCTTTTCAGTTCATATAACCCAAATACACTG
ATGTCAACGGCATATTATCGAACAGATCTATACCCTCGCCAACTAGAAGAGGTACCCGTG
ACAAACTTTTTTGGTTCAGTCATGGAGACGATACACACTGATTCTGCATATAAAGCATTC
GCTGGCAAAGACTCCAAGAAGTCTACATAAGAGATGCCTCTTCGGCAGTCCAGCCAAGAC
TTACGACGAACACTTGCAAGTTCAGATGTTCAGTATCCAACTAGTGACTCAAATGTTGAG
GATCCACAAGATTCCTGTCCTTTCACAAACTTTTGGATTTCTATGCATGGTAAAATGAAC
AAGGTTGAGGGTCTTGATAGCTGGGTGAACTATGGCTTGTTTTTGATGTTTCCAATGGTG
GCAATGTCTTCTTGGATCTCATCTTGAAGAAGTGGAGACAAGACATCAAATGGATACTCT
GAAGGAGCGCCATGGTACTGCGTTGTTTCATTTCCATGTTTGTTGAAAACGTTGGCCCGG
TGGAAGCTGTTCTATCTCACCAAAAATACGCGAGCAACTAGTTGAGGCGCCACCCTTGCA
CTGCAAAATAGATTTTACAGAAACTCTTTGACAAATAGTGCAATGTAGAAATTCTTCCTT
TAGTTCTCTGATTTGGGAGACATCAAATAGTTGAACTATTAATACTATACCATTCCATAT
GGTTTGATTTTTAAATTCAGTTTAGGTTTTCTGCGACACGGTAAATCCGTAACCATAATT
TATTCGACTTCAAC
