Microarray Probes on PGSC0003DMT400054524
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_24488_PI426222305 |
JHI_St_60k_v1 |
TTTCTAGGTCTTTTCCTGCGTCTGCTTTTGAAGAGGAGGAGGAAGAGGAGAAGAAGTGAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400054524
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400054524 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G56580.1 |
+2 |
6e-39 |
135 |
81/138 (59%) |
Protein of unknown function, DUF538 | chr1:21198402-21198902 REVERSE LENGTH=166 |
Transcript Sequence (711 bp)
>PGSC0003DMT400054524 711 pgsc_dm_v3.4
TAAATATACCCCAAATCCCAAATCAATTACTCACAAATTCAAAATTACAATCCTCAAATC
ACTCTCTGCATAAAAAACTCAAATCTCTGTGTAATCGGAAAACATGTCTCAAGTTATCGC
AAGCCACCGTGAAAATGCCGAAGTTTACACAGATCCGGTGGTTTGCAAGCAGAAATCACT
TGAACTTCTGAAGGAAATCAACATGCCCAATGGTCTTCTCCCACTTGAAGACATCGTAGA
AGTCGGCCGCAACGCTGAAACCGGATTCGTGTGGCTGAAACAGAAGAAGGCGAAAGAGCA
CAAGTATAAGAAGATCGGGAAGCTCGTCTGGTACGATACTGAGGTGACGGCGTTCGTGGA
GAATCGCCGGATGAAGAAGCTCACCGGTGTGAAGAGCAAGGAGATCCTCATCTGGGTTAC
AATTTCTGATATTACAATTTCCGATCCGGAGTGTAAGAAGATTAACTTTGCTACCCCTAC
TGGACTTTCTAGGTCTTTTCCTGCGTCTGCTTTTGAAGAGGAGGAGGAAGAGGAGAAGAA
GTGAAGTTGAAGGTTTCAGGGGTATTTTAAGGAATTAATAATGTGATTTTCATTTTACTA
GTACTATTTAAATAATTAAATTACTGTCTTTTTATCTATTTTAATCCTATCCTATGTAAC
CAAAGTTAAAAGTGAAAATGGAACTATAGTTTATACTGGATTATATTTTTC
