Microarray Probes on PGSC0003DMT400054442
Probe ID | Chip | Probe Sequence |
---|
CUST_24630_PI426222305 |
JHI_St_60k_v1 |
AGCCTAAAAGAAGCTAATAGACCGACACTTGCTTGGTACGCGAAGGAGGATGATAATAGG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400054442
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400054442 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT5G40010.1 |
+1 |
8e-42 |
147 |
64/143 (45%) |
AAA-ATPase 1 | chr5:16020218-16021762 REVERSE LENGTH=514 |
Transcript Sequence (447 bp)
>PGSC0003DMT400054442 447 pgsc_dm_v3.4
ATGATGATGATGCAAGATGTTTGGAATCAGTTAGGTCCAGCCATTGCAACAATCATGTTT
GCCTGGACCATGTACCAGAACTATTTCCCTCATGAACTTCGTGGTCATCTTCGAAGGTAT
ACCGATAAACTTGTGAGCTATATCTATCCTTATATACATATTACATTTCATGAATATGAA
ACTGATGGTTGGTTTGAGCGTAGTAAAGCTTATGTAGCTATCGAAAGGTATTTAAGTAAG
AACTCCAGTATACAAGCTAAGCGTCTAAAAGCCAGTGTAGTGAAAGATGGTCAATCTCTT
GTTCTATCGATGGATGATCATGAGGAGGTAACAGATGATTATGAAGGGGCGAAGGTTTGG
TGGATATCTAGCCTAAAAGAAGCTAATAGACCGACACTTGCTTGGTACGCGAAGGAGGAT
GATAATAGGGAAGGCGATTTCTGTTAG