Microarray Probes on PGSC0003DMT400054335
Probe ID | Chip | Probe Sequence |
---|
CUST_52059_PI426222305 |
JHI_St_60k_v1 |
CCTTTTATGAAACTTTTACCCCATTAATGTTTGGTAAGGCTTGACATTCCTTCTCTGATA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400054335
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400054335 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT1G24340.1 |
+2 |
5e-93 |
317 |
153/239 (64%) |
FAD/NAD(P)-binding oxidoreductase family protein | chr1:8635416-8638866 FORWARD LENGTH=709 |
Transcript Sequence (3617 bp)
>PGSC0003DMT400054335 3617 pgsc_dm_v3.4
TTTTTTCTTATAAATTTTATACAAACTTGCTTTAAAATTCGTGGAATCATGCATCATTCC
AAGTCACCAATATTAATGCCACATGTGTTCAGTCAATGGTCAGAGGTGTTCAATATATTG
TGTTTCAGCGAGTTCAAGGGTCCAGTTGGCAAAGTCGTAAGTATAAGCGTCTAACATACA
AACGGAAGGACCTCCCAGACCATTCCGCCAATTATATATTCTGTCAAGTTTTATGTTAAA
CGGTCCGAAATAATGCAAAATTAAGAAGTGACTATAACCAACCTTTCAAGCAATTTATCT
CTAACAAAATGTTGTAGTAGCTCTTCTACTTCTTAAAATGGATACTGCAACTTAGTTTTC
ACTTTCTTATTGTGCCGTTGAATACAAAATGTTACATGGGACAATTTGCACTTTTATGGT
TTCTTAAGTCATCAAACTACATTTTGTTCATGTCAGATCCTCTTAACATATGAAATGGAA
TGATTGTACCCAATCCCAATCAGAGAAGATATCACTGAATAAATGATGTAAGTTCATATG
TAATTTCTGTTTTTAAAGATAGATTGCAATTTAGATTGAAATTTTTGGTGATCAAATCCA
TGAAAAAACTGGCAGATGTATAATCTGTTATTATTCCATTAGCGCATCAGACAAGTCTAC
ATACAAATGGAAGGTATGTGTCCTTAAATGAGATGGGTAGAGTAGTATGACATCCATCTT
ATTAGATACATTTATTGCATCACAATTTTATTGAGTTGCTTCGTTGACGATACATCTTAT
ATACTTATGATTGTTTTGTTTTCTGCAAACTTTTTCCTTTTTGTTGTCAGATTTTGATCA
GATTGCGAGTCCTGTCTCTGTTGCACACTTCTCCCTGTACAAGCTCTCCAGAATACTGCT
TAAGCACCTTGAGAAACTTGGTTTCCATATGGTAAACTCTGAAAAGCGTGAGTATGGCTC
TATTGGCGAGAGGGAGATCTTTATGGGGCATGAATGCATTGCAATCAATGGTGCTGACCA
TGGTGTCACTGTAACAGCCTCTTTCCTTTCTAAAGGGAAGTATGCGACGAGAGATATTCA
GTGCCATTTCCTTGTTGGTACAGACGGTACAGGAAGAAGTGTCAGAAAGTCCTTAGGAAT
CAGCATGAGAGGTGAAAAGGACTTACAAAAGCTTGTTAGTGTCCACTTCCTGAGCCAAGA
GTTAGGGCAGTATCTCATTAACGGAAGACCCGGCATGCTGTTTTTCATCTTTAATAAAGA
TGCTATTGGTGTTCTTATTGCCCATGATCTCAAGCAAGGGAAATTTGTCCTGCAGGTACC
ATTTTATCCACCCCAACATAAGCTTGAGGACTTCAGTTCGGAGATGTGTAAGAGATTGAT
GTTCAAATTGGCCGGCCTAGAGCTTAAAGACGTCAACGTGATGGATATTAAGCCTTGGGT
GATGCATTTGGAAGTAGCTGAGAAGTTTCTATCTTGTAACAACAGGATAATACTTGCTGG
TGATGCAGCTCATCGATTTTCTCCTGCTGGTGGTTTCCGTACGCAATCTGTTTGCACATT
TATCATGTTTTTGTTTTGTCAACTTAAAACTTGTAATTGTTACCTTTCTAAAAATTGGTA
TTATCTTGTCATGTCTTGGATATTATTAAGAATAAAGTTTTTGCGATTCCTTTTCGCTTG
GGAGAGTTGGGGGAGGGGAGAGAAGACAAATTAATGCAGTACATTGTTTTTCTGTCATTG
ATTCGTACAAGACTGCTTCCTAAAATGTTGATGTAAAGGTAAAAATAGCAAAGTTATTTC
TGTGGGAGGGAGATAAAAGATTTCCATGTAGCTCAAAATATTGGAGATATAATCAGCTTA
CGAGAGCATTTGTTGGTTGGAGGACATCTGAACTGCAATCAGGATCTACATTATGATGTT
AGTTACTATGCATTGCCCTGGTGATTTTAACACGGTTGATATTGTGTCTAATTATATGTA
GAGAACCTGATTGCAATGTGGTAATTTTAAATGACATAATCAATTACGTTTGTAATTGTG
TTCCCTCTCTAACCATTAAACCTTTTAGATGAAATGGTTCACACAATTCAATATGTAATC
AAAGTGTGTCCATGTTCTTTCTCTAATTACCTGTCTAAAAAATATTTCTGACATGCTTGG
CCATGAGATCCTGGGAAACACTTAAAAGGAATTCTAAAGACATAAGGCCACCAATGGGTG
TGACATAACGACTAATGAAGTGGGTATGAATTTTGGAGACCAGGGTTCAAGTACCAGAGT
GTTCCCATCTATCTAATAGAGTACCTATGTTCGTGGAAAGTAGCAAGTAACCAGTGAAAG
TAGCAAATGCAGGTAAATGAAAACCTGAAACTTAATTTTTATTACATCAATATTTCATTA
AGACATTATGTGTTTTTGCCTGGAGTACATCGAGCTCTTAATGACACTGTTGGTTCCATT
CTGCCATCTGTACTTCAAAGGACAATATTAGATAGAATATTCAGCATAGGTCGTGCACAA
CTCTCAGTTTTTGTATTGAATGAAAATAATCCACTTGGATCTGCAAGGCTAGCCAAATTG
AGACAGATTTTTGATGGACAGAGCCTTCAGCTCCAGTTCCCTGCTGAGGATCTTGGTTTC
AGGTATCGGAAAGGAGCATTGGTGTCTGAAGATGATAGTGTGTTGAATATGCATGAAGCA
CCAACAGGACGAAGAAGGGATTATATTCCTTGCTCGGAACCTGGATCAAGGCTCCATCAT
ATGAATGTTAAACTTCTTTCAATCCAATCAAGCAAGGTATGGACTCTTTCAACGGAACAT
TGCCTTTGTAGGAGCCAGACTTTGTTAGATCACGGTCTTGTTCGTTCATCTCTTGACACG
GGTGGAGAAGCCAAATAACTGAATCAAAAGAGGATTTTCTTATTTATCTCTAGCCTTGCT
ATTAGATTACAATATTCAGACTTGCAGCCATCGTATTTCAAGTCTCCATTACTATTTCTT
TTCTATCAGAATGCAATCTTATGCAGGAAATATTCTCTACTCTAGACCTTGTATATGTAG
ATAAGGTTAAGTTTGACCTTCTAATAGCACCCATTCAAGGAGTCCTACTGTCTGGCTCGA
GCTGCACTAGAGGTGGCCAGCAAATTTAAACTCCCTTTAAAGGTTTGTGTATTGTGGCCA
AACGGAAGTAGTGAAAGAGCTGGAAGAACTGAGGCTGCATTGACACCCTGGAAATCTTTT
GAAGAAGTTGTGGAAGTGAAGAGGTCATCAGATACGCCATCCTGGTGGGACATCTGTTAG
ATGACAGACAGAGGAGCCATATTAGTGAGATCTGATGAACACGTTGCTTGGCGTACAAAA
TCTAGAAATGCAGATCCCATCATGACGATGAAAAACGTTTTCCACGTTGTTACAGGAGTT
AATTGCATCTGATAGCACCTTTTATGAAACTTTTACCCCATTAATGTTTGGTAAGGCTTG
ACATTCCTTCTCTGATATACATTAGCTAGAAACAAGGTTGGTGTACTTCCCTTTCGGATG
GGTAGAGTTACCCATTACCTATACTTTCAGGTACTCAATGGAATAATTGAGGTGTAGCAA
GTTTTCGGACACCACCA