Microarray Probes on PGSC0003DMT400054236
Probe ID | Chip | Probe Sequence |
---|
CUST_51993_PI426222305 |
JHI_St_60k_v1 |
ATTCAGTAATTGTTGATGTGGATTCAGATGGCAATGTCACCGTCCTCAATGGCAGTAGCG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400054236
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400054236 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT5G50920.1 |
+1 |
0.0 |
1372 |
785/916 (86%) |
CLPC homologue 1 | chr5:20715710-20719800 REVERSE LENGTH=929 |
Transcript Sequence (2733 bp)
>PGSC0003DMT400054236 2733 pgsc_dm_v3.4
ATGGCTAGAGCTTTAGTTCAGTCAACAGATATTCTATCTTCAGTTGCTGTTGCCGGTGAA
AGGGCTGGACAATTCAATGGATCCCGGAAAAATCAAAGAACTGTTAGAATGATATGTGAT
GTAAAGTTTCCTTCCTTAAAGCTGAAGAGCTTTGTAGGACTGCGAGGGTGCAATGCATTA
GATACACTACTTGTAAAATCTGGAGAAACTCTCCATTCAAAAGTGGCAGCTGCAACTTTT
GTCAGACGGTCACAAGGATGCCGATTTGTCCCAAAAGCAATGTTTGAGCGCTTCACCGAG
AAAGCAATAAAAGGCATTATGCTTGCGCAAGATGAGGCCAGACGACTAGGTCACGACTTT
GTCGGGACAGAACAGATCCTGCTGGGTCTTATTGGTGAGGGAACTGGTATTGCTGCTAAG
GTTCTTAAATCCATGGGAATTAATTTGAAAGATGCTCGTGTGGAAGTAGAGAAGATTATT
GGCAGGGGTAGTGTATTTATTACAGTGGAAATCCCTTTTACTCCTCTTGCAAAGCGTGTT
CTAGAACTATCTCTGGAGGAAGCCCGCCAACTAGGGCATAATTACATTCACTCGGAACAC
TTGCTACTTGGATTGTTGCGCCAGGGTGAAGGTGTGGCTGCCCGTGTTCTTGAAAACTTG
GGTGCTGACCCCAGCGAGAGTAGTGATGGTGCTACTGTTGGAGGTGGAACTTCTGGCCTA
AAGATGCCTACATTGGAGGAGTACGGCACGAATTTGACAAAGTTAGCTGAAGAGGGGAAA
CTAGATCCTGTAGTTGGAAGACAGGCTCAAATCGAGCGTGTTACTCAAATCTTGGGTCGC
CGTACAAAAAACAACCCTTGTCTTATTGGAGAACCAGGTGTTGGAAAAACTGCTATTGCC
GAAGGGCTAGCTCAAAGAATCGCTAATGGTGATGTCCCTGAAACAATAGAGGGAAAGAAG
GTCATAACACTTGATATGGGATTGCTTGTTGCTGGGACAAAATACCGTGGAGAGTTTGAG
GAAAGACTGAAGAAACTAATGGAGGAAATTAAACAAAGTGATGACATAATACTGTTTATT
GATGAAGTACACACATTGATTGGAGCTGGAGCTGCAGAGGGAGCAATTGATGCTGCAAAC
ATCTTGAAACCTGCCCTGGCTAGACGCGAGCTACAGTGTATTGGAGCCACAACCCTGGAT
GAGTACAGAAAGCACATTGAGAAAGACCCTGCACTGGAGAGGAGGTTCCAGCCAGTTAAA
GTCCCTGAACCTTCTGTGGATGAAACCATACAGATCTTGAAAGGGCTTCGGGAGAGGTAT
GAGATTCATCACAAGCTCCGTTACACTGATGAGGCAATAGAGGCTGCTGCCAAGCTTTCT
CACCAGTACATCAGTGACCGCTTTCTGCCTGATAAAGCAATTGACTTGATTGATGAAGCT
GGTTCCCGTGTTCGGCTTCGTCATGCACAGCTCCCTGAGGAAGCAAGAGAGCTGGAGAAG
GAGCTTCGCCAGATTACAAAGGAGAAAAATGAATCTGTCCGCGGTCAAGATTTTGAGAAG
GCTGGGGAGTTGCGTGATAGAGAAATGGATCTTAAGGCACAAATCTCAGCCTTGATATAC
AAAAACAAAGAGAAGAGCAAAGCAGAGTCTGAGGCAGGAGATGCAGCAGGTCCCTTAGTG
ACAGAGGCAGATATTCAGCACATTGTCTCTTCTTGGACTGGCATTCCTGTAGAGAAGGTC
TCAACTGATGAATCTGATCGCCTCCTAAAAATGGAAGAAACACTTCATACCCGAGTCATT
GGCCAGGATGAAGCTGTAAAAGCCATTAGTCGTGCTATCAGACGTGCCCGTGTTGGACTC
AAGAATCCCAACCGACCTATTGCCAGTTTCATCTTTTCTGGTCCAACTGGTGTTGGGAAG
TCAGAACTGGCCAAGTCTTTAGCAACGTACTACTTTGGTTCTGAAGAAGCAATGATTCGG
CTTGATATGAGTGAGTTTATGGAGAGACACACTGTGTCTAAACTCATCGGTTCTCCCCCT
GGGTATGTTGGTTACACTGAAGGTGGTCAATTAACTGAAGCTGTGAGGCGTCGACCTTAC
ACTGTTGTGCTCTTTGATGAGATTGAGAAGGCTCATCCTGATGTCTTTAACATGATGCTT
CAAATTCTTGAAGATGGAAGATTGACAGACAGCAAGGGCAGAACTGTCGACTTCAAGAAT
ACACTCCTCATCATGACATCGAATGTTGGAAGCAGTGTGATAGAGAAAGGAGGTCGTCGT
ATAGGTTTTGATCTAGATTTTGACGAGAAGGATAGTAGTTACAACCGTATCAAGAGCTTG
GTGACTGAGGAGTTGAAACAGTACTTCAGGCCAGAGTTCTTAAACAGATTAGATGAGATG
ATTGTATTCCGTCAGCTCACTAAGTTGGAGGTGAAGGAGATTGCTGATATCATGCTTAAG
GAAGTCTTTGTGAGGTTGAAGAATAAGGAGATAGAACTTCAAGTGACAGAGAGGTTTAGA
GACAGGGTGGTTGATGAAGGATACAACCCAAGCTATGGAGCTAGGCCATTGAGGAGAGCT
ATTATGAGACTATTGGAGGATAGCATGGCCGAGAAGATGCTTGCAAGTGAGATCAAAGAA
GGTGATTCAGTAATTGTTGATGTGGATTCAGATGGCAATGTCACCGTCCTCAATGGCAGT
AGCGGTGCTCCCTCAGATCCACAAATTTATTGA