Microarray Probes on PGSC0003DMT400053731
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_34987_PI426222305 |
JHI_St_60k_v1 |
TCTTCTCATGACACAATTCCCGAAAATCTTGAATTCCAACGTCTCGAAAATGATCCTCAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400053731
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400053731 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G37300.1 |
+3 |
4e-24 |
98 |
72/183 (39%) |
maternal effect embryo arrest 59 | chr4:17554805-17555498 FORWARD LENGTH=173 |
Transcript Sequence (1011 bp)
>PGSC0003DMT400053731 1011 pgsc_dm_v3.4
CCAAACCTTCAAAATATCTTTTAAGGAAGAAATATCTAGCCCCAAAGATATCTAACTACA
TTATAACATTTGTAGCACATGATATTACATTGATGAACCCCTTCAACTAACACAAATAAA
TAATATTACCCTTTTTTTACTTCAAGATCTTTAACAAGAAGAAGAAGAAGAAAATGGAAG
TGAATGGAAATATTAGACCAAATAGAAGTGATGTTCATTTATCAAAAGAGGAAGAAACAA
AGATAGAAGAGGCAACAAGAGAGTATTTTGATGACATTGCACCAAAAAGACACACTAAAC
CTCAACGAAGTGATTATTCTTCAACTTATGTTGATCACATCAATCTCTATCCTTCTTCTC
ATGACACAATTCCCGAAAATCTTGAATTCCAACGTCTCGAAAATGATCCTCAGAAATTGG
TTTACAATGGCAGCCAAGTGACAGAGGAATTTATTGAAACAGAGTATTACAAAGATCTTA
ATTGCATTGACAAGCAGCACCACACGACAGGAACAGGATTTATCAAAGTGGAGAATAATG
GGAACACTTTCAATATAGGAGATGATTCTGCTACTGATCCAAGCCATGTTTACAAGGGGA
ATCCAGCTACTAATGATTGGATTCCTTCTGCTGTTGATGAGGTTAATTTTATCTCAGGAA
AACCAAACAGAAGTGATAACTGAAATTGAGTCTTTGATAAGGGCAGTAGCTGCTTATTTT
GTATTTCTGTGAAGCTTGGCTTCAACTTGTCTCTCTTTTGTTTGGTTGTATTTGAATAAC
ATGCTATATGAATTATTTCAGACGATTTTTCCCTATCTCCCTTCTCTTTTTATTTCCAGC
AAGCAGTCTGCTACTTTTTAGTTTTAAAACGAAGATGTAAATTAGCCAAACATCCGCTAA
GGGAGTGTGATGAAATGGATGGAATAACCTAAGTCATTAACCAGAGGTCTCGAGTTTTAA
CTGTTGTGAACAAAAATAGCATTATAAAGGATGCCCTTTTCTTGTTGTGTC
