Microarray Probes on PGSC0003DMT400053696
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_35000_PI426222305 |
JHI_St_60k_v1 |
GCAAAATTGCTAGGTGCAGGGGAGGCTTCTTTTGTTCAAACAAGGACAATTGCAACTATT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400053696
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400053696 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G47570.1 |
+1 |
0.0 |
562 |
352/906 (39%) |
Leucine-rich repeat protein kinase family protein | chr3:17527611-17530748 FORWARD LENGTH=1010 |
Transcript Sequence (2979 bp)
>PGSC0003DMT400053696 2979 pgsc_dm_v3.4
ATGGCAAGAACTTGCAATCTTCTCTTTGCTCTTGCAATTTTCATTATGCTTCATCGCCAT
ACTTCTTCACTTGCTACTATTAGCACTGATAAAGCCGCTCTTCTTTCGTTGAAATCTCAG
ATTTCCTTTGATCCTAACAACATCCTAGCAAGAAACTGGTCTTCTTCCAGCCCAGTTTGC
AGCTGGATTGGAATCACTTGCAGCTCCCGCCACCACCGAGTCACTGCTTTAAACATATCT
AGCATGCAACTTCATGGTACCATTTCTCCACACCTTGGAAACCTCTCATTTCTTGTTTCC
CTCAACATAAGTTACAATGCTTTCTATGGAGATTTACCAGTAGAGTTGGCTCATTTGCAG
AGGCTGAAATTTATAAGTGCCACAAGTAATAACTTCACCGGAGCCATTCTATCATCTTTA
AGTTTGTTACCGAATCTACGCTTTGCGTACCTTTCGATGAATCAATTTTCAGGAGAAGTT
CCTTCTTTCATTTCCAACATTACAAAGCTGGAAGTGTTGAGTATGCAAAATAATTTTCTA
AAAGGAGAGATCCCTCGGGAACTCGGTGATCTTTGCTATCTGACCTATTTAGATCTGCAA
TTTAATGAACTTAGTGGCTCTATACCAGCATCAATCTTCAACATTACAACTATGAAAAAC
ATTGGTCTTACCTATAACAATCTTACTGGTCAGCTTCCAACAACTATATGTGACCATCTT
CCAAATTTGAAAGGGCTTTACCTCTCAAGAAACTACCTCGGTGGTGTGATTCCACCAAAC
TTAGAAAAATGCAGAAAGCTTCAATTTTTGTCATTGACTTACAATGAGTTTACTGGAACT
GTACCAAGAGAGCTAGCCAACTTAACAGCTCTTACAAAATTATATGTCGGAGGTCTTCAT
TTGGAAGGAGAGATACCAGTGGAGCTCGGTAATCTGAAGAAACTACAAGCACTAGGATTA
TCAGGGAGTCGGTTTAGTGGTTCTGTCCCTGCAAACATTTTCAACATGTCATCACTGCAG
GCCCTAGATATTGCACAAAACAAACTTTCAGGTACTCTACCTTCAGATTTAGGTTGTGCA
ATGCCCAACCTAGAAAAATTCCTTTGTGGAGGAAATCATCTTAGTGGTTTTATCTCTCCT
ACTATCTCAAATTCTTCAAGACTCAGAATACTTGAGCTCTCAGGCAATAGTTTCACAGGT
TCGATTCCGGGATCACTTGGTAAGTTAGAGTACCTTGAGTTTCTGAGCTTGTGGGGGAAT
AATTTTGTCGGCGATTCAACATTGAGCTTCCTCACATCATTGACAAAGTGTAGGAAGCTA
AGATCACTCTGGTTTGATAGAAATCCATTGGATGGTGTCTTACCTGCATCAGTTGGTAAT
TTCTCAAACTCACTGCAAACTTTTGGAGGAGATGGTTGTAAATTGAAGGGCACCATTCCT
CGAGAAATTGGTAATCTTACAGGAGTGACAAGGATAGATCTGCAATACAACGAGTTGACC
GGACATATTCCAAATACTGTCCAAGGAATGTTGAGCCTTCAAGAACTTTACCTACAAAGC
AACAAGATAGAAGGAACCATACCAGATGTTATGTGCAGTTTGAAGAATCTTGGTGCGTTA
GACTTGTCAAGAAATCGGTTTTCTGGTTCAGTGCCACCATGCTTAGGGAATGTTGCTAGT
TTGAGGACACTTTATCTAGCTGTTAATAGGCTGAATTCTAGATTACCTGCAAGCTTGGGG
GGCCTTCGTGATCTCATAGAATTCAATATTTCATCAAATTTATTGAGTGGAGAAATTCCC
TTTGAGATTGGAAACTTAAAGGCTGCAACACTCATTGATCTATCAAAAAATGATTTTTCT
GGTAAGATTCCTAGCACTCTAGGGGGTCTAGATAAATTGATTAATCTTTCTTTGGCACAT
AATAGATTAGAGGGGCCTATTCCAGATTCATTTGGCAAAATGTTAGCTTTAGAATTCTTG
GATTTGTGCTATAACTATCTTAGTGGTCAAATTCCGAAGTCATTAGAAGCTCTTGTGTAT
CTCAAATACATGAATTTCTCATTCAATAAACTCAGTGGAGAAATTCTCACTGGTGGTCCT
TTTGCTAACATCACCAGCCAGTCCTTCCTATTCAATGATGCATTATGTGGTGACTCTCGG
ATAGGATCACTCCTCGCGTTGACTGTTGGATATGCGGTGTTAAGATTGAGAAAGACAAAG
AAAAATGCAAGTCAAGTAGATGTGTCTTTGGTAAAAGAGCATGAAAGAATTTCCTATTAT
GAACTTGAACAGGCAACTGAAGGATTCAATGAAAGCAACTTGCTTGGTAGTGGGGGTTTC
AGCGCGGTCTACAAAGGGATACTTAAGGATGGTACTCTTTTGGCAGCAAAGGTATTCAAT
GTACAATTGGAGGGTGCATTCAAAAGTTTTGACATGGAATGTGAGATACTCCGGAACCTT
CGCCACAGAAATCTAACCAAAGTCATCACCAGCTGCTCCAACCTTGATTTCAAAGCCCTA
GTGCTGGAATACATGCCCAATGGGACACTCAATAAATGGTTATACTCCCACAACTTGTTC
TTGAATTTATTGCAGAGATTAGATATAATGATCGATGTTGCATCAGCAATGGAGTATCTC
CACAATGGCTATTCAACACCTGTGGTGCATTGTGACTTGAAGCCAAGCAATGTCATGCTA
GATCAAGATATGGTTGGCCATGTCAGTGATTTTGGCATTGCAAAATTGCTAGGTGCAGGG
GAGGCTTCTTTTGTTCAAACAAGGACAATTGCAACTATTGGATATATCGCTCCAGAGTAT
GGACAAGATGGAATAGTATTCACGAGTTGTGATGTTTATAGTTTTGGCATACTAATGATG
GAGACGTTCACAAGAAGAAGACCAAGTGATGAAATATTTACAGGAGAAATGAGCATACAA
CGTTGGGTTAGTGATTCCTTTCCAAGTGGAATTCATTAG
