Microarray Probes on PGSC0003DMT400053173
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_11377_PI426222305 |
JHI_St_60k_v1 |
CTAACAGCTCATGATCTTAGGACCGTTGATGATCAAATTTGATTTAATCTAACGGTTGTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400053173
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400053173 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G07350.1 |
+1 |
4e-75 |
240 |
144/311 (46%) |
Protein of unknown function (DUF506) | chr3:2347674-2348570 FORWARD LENGTH=298 |
Transcript Sequence (1352 bp)
>PGSC0003DMT400053173 1352 pgsc_dm_v3.4
TCTTATTTTATATCCTAAATTTAAAAGTTTTAAACAATTTTAATATATTTTCTTCACAAA
AAAAAAATGTCTGGAAATGGCAGATTGAAGAGAGTTACTGACCCGTTAAACGATAAAGTG
AAAGCTCGAATCGTCGGCGCCGATCTCCGGGAACTTGGTTACGTCAGCAGCGGCAGTGAA
CACAGCGCCGATGCTGATAGCGACGTCGTTTCACCTAGCTTTTCAGGTCTCGTTTTTGGC
TTCTCCGATGATTTGGATCAAAATCAGTCGTCGGAAAATGATAACTCCGATACTGAGTTA
GATGAGTCGTCAGTTGATAACGTACCGGAGATGATTTTTCAAAGCGATACAGATTTGTTT
AGGAATGTGCTGTGTTCTCACGTATTTAAAGCGTTAGAAGTTTATTCGTGTATGAAATCG
AGTAAATCGGTACTCAGAAGGAATGTAATGATGTGTTTGAGAGATTTTGGTTATAATGCT
GCGGTATGTAAAGCAAAATGGGAGAGCTCCGGTGGACTTACCGCCGGTAACTATGAGTTC
ATCGATGTCGTTCGATTGGACGCCGTTAACAGTCAAACTCGTTACTTCATCGATTTGGAT
TTCGCCGCGGAATTCGAGATCGCGAGACCGACGAACTTCTACGAACGGTTATCGCAGTTG
CTACCGAAGGTTTTCGTCGGAAAAAGCGAAGAATTAAAGCAGATACTGAGAACAATGAGC
GATGCCGCTAGACGATCGTTGAAAAGCAGAGAACTACACCTTCCTCCATGGAGGAAACAC
CGTTTCATGCAGAACAAATGGCTCGGTCCGTACAAACGGACGTCGAATATCACTCCGTCG
ACTAACACTCCGGCGTTGTTTTTACCTCCATCGAATCAGGCATACACCGTAAAGTGCCGA
TCCGTTGGGTTCGAAACCGCCGTTCACGGCGGTCTCTGGTTGCCGGCGGTAACCCGGACT
AGATGACTTCTGATAATGGAGTATTATTATTTTTTATTTTTTTTAAAAGAGTCGTCGTTT
TGTGTTTAACAAATCGTCGTCGTTTTGTGTACCATGTGAAAAAAGAGATAAAATAATTAT
CCAAACATGGTGTAAAAAGTGTAACGCGGCAAATACCCATTGTGTGCTTTTGTTTATTTT
CTTTTTATTAAGCAAAAGATTCACGTGCTAACAGCTCATGATCTTAGGACCGTTGATGAT
CAAATTTGATTTAATCTAACGGTTGTTATAATTTTTGTTATAATCATTATGATGGTGATG
TATATTAATGGATTAATGGGCCCAAAATGTACTATAAATTATCTTATCCATGGGATTAGA
TAAAGAAGATATCGATATGAGGTTGACGTGGC
