Microarray Probes on PGSC0003DMT400053120
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_31811_PI426222305 |
JHI_St_60k_v1 |
AGATCGATGAACTTTTTGCTTAGGAGGTGTTATAACCTTAGGTTATCTCCTATGTTTCAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400053120
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400053120 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G38310.1 |
+1 |
7e-82 |
249 |
123/154 (80%) |
PYR1-like 4 | chr2:16050251-16050874 FORWARD LENGTH=207 |
Transcript Sequence (906 bp)
>PGSC0003DMT400053120 906 pgsc_dm_v3.4
CACCATATGTATATGTAAAGAGTACTCCATCCTCACCTCTCTCCTTTGAAGAAGAAAAAG
AGAGTAGTAATAATAGAAATGCCTTGTTCACTTCAGCTGCAGAGGATCAACCACACAATC
ACCACCACTCTCGCCGGAAACTTCCACAAACCGCCTCAACCGACATGGATTATCCCGGTG
CAGTTCTCAGTCCCTAACAATCACTTACATTACCACACCCACGCTGTAAGCCCCAATCAG
TGCTGCTCCGCCGTGGTGCAGACCATCTCCGCCCCGATCGACGCCGTATGGTCACTAGTC
CGCCGATTCGACAATCCGCAAGCTTATAAGCATTTTCTCAAAAGCTGCCACGTCATCGTC
GGAGACGGAAACGTCGGCACATTAAGGGAGGTTCAGGTAATTTCCGGCCTCCCTGCCGCA
TCTAGCAAGGAGAGATTAGAAATCTTAGACGATGATGAACACGTCATTAGTTTCAGCGTC
ATCGGCGGCGATCACAGGCTGAACAATTACCGGTCGGTGACGACGCTGCATCCGGCGGAT
GATGAAAACGGAACGGTGGTGGTGGAATCGTACGTAGTGGATATTCCAACAGGGAATACA
AAGGAAGAAACGTGTGTATTCGTTGATACAATTGTACGTTGCAATTTGCAATCGCTAGCG
CAAATAGCGATTGCAAATTGCTGAAAACATGCCTACAACTAATTTGTAGTCATTGTGACT
ATTTAATTAGATTAATTTTGTATATTTCTTTGATTGATTTTGTTTTTTTGGTGATTTTTT
TTTTTTGGAGTGATAGATCGATGAACTTTTTGCTTAGGAGGTGTTATAACCTTAGGTTAT
CTCCTATGTTTCATTTGTTAGTGAAAAAAATCTCCAATTTCAGTGAATGTTACTGTTCGA
AATATT
