Microarray Probes on PGSC0003DMT400052636
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_19034_PI426222305 |
JHI_St_60k_v1 |
AAGACCTGATAATTTGTACCTTAAATACAGATGGCAGCCTTTTTCTTGCAACCTGCCAAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400052636
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400052636 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G42570.1 |
+2 |
1e-169 |
488 |
215/317 (68%) |
TRICHOME BIREFRINGENCE-LIKE 39 | chr2:17717498-17719921 REVERSE LENGTH=367 |
Transcript Sequence (1577 bp)
>PGSC0003DMT400052636 1577 pgsc_dm_v3.4
TGCTTTCTTCCTCCCTCTCTGCTTTCCCCTGTTCCACCCAACCCCACCCACCCCACTCCC
TCTCTTTATATATACACTGTACTAACATTTTCATTTGAATTTCAACACCCAAATTAAAAA
CATGGGGTTCCTATTTCTCTCACTATTATTGCTTTTCTCAGTAGAAACAAAAGCAAAAAC
AGAGCATTTTTTTCTGAACAACACCAGCAGCACCAGCAGTAGCAACTCCATAAATGGAAT
TAAAAGTAGTTGTAATATTTACAGTGGCAAATGGGTTTATGATTCTTCATACCCTCTCTA
TGATTCTTCAAATTGTCCTTTTATTGACAATGAATTCAACTGCCAAAAGTACAAAAGACC
TGATAATTTGTACCTTAAATACAGATGGCAGCCTTTTTCTTGCAACCTGCCAAGGTTTAA
TGGGTTGGTTTTCTTGGAGAAATATAGGGGGAAGAATATAATGTTTGTGGGTGATTCATT
GAGTTTGAATATGTGGGAATCATTAGCTTGTATGATTCATTCATGGGTGCCAAATGCTAA
AACTGCTGTCATAAGGAATGAAGGAATTGCTGAAATTGTATTTCTGGATTATGGAGTAAG
ATTGTTATTGTACCGGACTCCTTACTTGGTAGACATGGTGAGAGAAAATGTTGGAACTAT
TCTAAAGTTGGATTCTATAATAAGTGGCAATGCTTGGAGAGGAATGGACGTCTTGATTTT
CAACAGCTGGCATTGGTGGACCCACACCAAAAGTTCTCAACCGTGGGATTATATGCAAGA
AGGTAATAAAGTATTTAAAGATATGAACCGTTTGGTAGCTTATTACAAAGGGATGTACAC
GTGGGCAAAATGGGTTGACCGAAATGTTGACTCATCTAAAACCAAAGTCTTCTTTCAAGG
AATTTCACCAACTCATTACGAGGGAAAAGATTGGAATGATCCAACAAAATCATGCAAGAA
TGAGAAACAACCCTTCTTTGGCATAAGGTATCCAGCAGGGACAACTCAAGCATCCATTGT
GGTTAACAAAGTACTAAGCAGAATTAAAAAATTTGTTCATTTATTGGACATTACAACACT
TTCTCAATATAGAAAAGATGCACATCCAACTTCTTATAGTGATCACAATACTTTAGATTG
TAGCCATTGGTGTCTCCCTGGATTGCCTGATACTTGGAACCTCCTTCTCTATACATCACT
CATTAGTTGAAGACGAAAATACGACCGGATTTTATGTTTTCTATAACAACACCTTGTTGT
AACAGCCAAAACATATCTGAACAGATGGTGTTGTTATAGAGAGGTTTGATTGTGGTGAAT
GATTTTCAATTGTAAGGTGATTTTGTGTTTAGGAATTTGTTTGACTTTAAATTGTCATTT
GATAATAGTCAACAAAATAAGAATGGTTAGTGAGTGTTGAAGTGTAATATAGAAAAAAAA
TGTGATTTTTAGGCATGAGAGGATGCCTTAATTAGTTGAATTTGATGAGGCATATTGCCT
TTGAATTTGTACTTAATTTCTGTTGATTCAATTGATGTTGTAAGATTATTTTTTATTATA
ATAATTTAAAAGTGAAA
