Microarray Probes on PGSC0003DMT400051879
Probe ID | Chip | Probe Sequence |
---|
CUST_25764_PI426222305 |
JHI_St_60k_v1 |
GCAGAGGCTTTGATGTACTTTGTTCAATTTTGAGATGTACTGTATTAAAGAGACTTGATC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400051879
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400051879 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT3G22600.1 |
+3 |
2e-31 |
117 |
52/105 (50%) |
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr3:8006711-8007397 REVERSE LENGTH=170 |
Transcript Sequence (870 bp)
>PGSC0003DMT400051879 870 pgsc_dm_v3.4
TATGAAGGTAGGCAAGGTTGGGTCACCCACACATAATTCCATCTCTCTTTTTTCAATTTA
TTGCACTATTTTCCCCTTTATAAACACTTGTCTTGTTATTTCCATCCTACTACTGAATAC
TCATCGATCACCACCCAAAAAGTAAGATTTTGAGAAGAAATTAAGTAAGTTCCAAGAAAA
TGAAGATGTTTGCTTGTGCAATTTTTGTGGCTATGGCTATTTTTTCAATACAAGTTAGTG
GTCAATCAGATAATTGTCAACAAGTGATTGTTGGATTAGCACCTTGTTTGGATTATATAC
AAGGGAATGCTACAAAACCATCATCAGGATGTTGCACTCAACTAGCCACTATATTGAAAA
ATGAGCCACAATGTTTGTGTCAAATGATTAATGGTGGTGCTTCTTCTTCTTTAGGAATTA
ATGTCAATCAAACACAGGCTATGGCTCTTCCCAAAGCTTGTAATGTTCAGACACCCTCTG
TTAGTCTCTGTAAAGCTACTACTCCGTCTGGTTCTCCAGGATCTTCTTCAGGTGGATCTA
AGGGTGAACCAAGTGGAAATACAGGATACACCATAAAGCTGCCATACTTTCTCTTGTTTA
CCCTTGTAGTTGCAGCATCATTCACCACCATCTGAGATCCACTTTTGTTTGCAGTGTGTT
TTGGAGTTTGGCACAATTTGGTTACGTTACTAGTTTTTTTTATTATTATTTACTTTGTTA
ATTTGATGTAAACTTTGTAATTCACTACGCTAAGGCAGAGGCTTTGATGTACTTTGTTCA
ATTTTGAGATGTACTGTATTAAAGAGACTTGATCAAGATTGAATTAATTTATAGTCGTGT
TGGATGATCAATCCTTTTTTTAAATACGCC