Microarray Probes on PGSC0003DMT400051728
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_25860_PI426222305 |
JHI_St_60k_v1 |
TACTTCACTTCCTCTCTCTCTACTCTCTCTATTAACGTGATCGGTGTGAGCTGATGAAGG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400051728
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400051728 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G28760.1 |
+2 |
0.0 |
615 |
423/994 (43%) |
Protein of unknown function (DUF3741) | chr4:14208640-14211811 FORWARD LENGTH=924 |
Transcript Sequence (3517 bp)
>PGSC0003DMT400051728 3517 pgsc_dm_v3.4
TTTTTTCATTTTGTGTTCTCATTAATCCACAAACTTTTTACTTCACTTCCTCTCTCTCTA
CTCTCTCTATTAACGTGATCGGTGTGAGCTGATGAAGGCTCTCCGGCGAGTTTCCCACCG
GAATGCTAATTTTCAGTTTCCGGCGACTTCTTTGCCGTGAAATGACTGGTAGATCTGTGT
CCACATTTTGAGCTTTTCTAAGTTATTTTTCACGCATTTTTTCAGCTACTGTATGAAACC
TGCGGCGGTGGCATTGTCAAGTGGTCCTGCATTTCATTGATTGAAGATTTTTTAGCATAA
CTGGAAGTGTTTTCATTTTCAGTTGCCATTTTTATACTCTCTTCCGATCTATCTTTTCTA
AGGTGGTGAGATGAATGGGTTTCAGAATGGAAAAAATTGCAATCTTGATAAACCTTTTCC
AGGATGCTTGGGACGAATGGTGAACCTTTTCGATTTAAATTCTGGGGTGGCAGGAAACAA
GCTTCTTACAGATAAACCACATGGCTCTCTTTCGAGGAGCCAATCAGATGTTGTCAGGAT
GTATCCTTCTGGGGATCAAATAGAGGAAAAAATGATTGTTTCAGATTTGAAGAGAAACAG
TTCAAACAGGAAATCAAATGGAACACCAATGAAGATGCTTATAGCCCAAGAAATGTCCAA
GGAAATAGATTCTAGTCAGAACCCACCTAGTCTTGTTGCCAAGTTGATGGGCCTTGATGC
TTTTCCAACTCGGAGATCTGTTTCAGCCACACAAAGTCATTTTGGAGGTCATTCTCGATG
TCATACTGATTCCTCTTTCAGTTATTGCCAGCACGAAAACGGATCTTTGATGGAAGAAAT
GCATCAGAAATTTCATCAATGCCCAGAAGAGAATGAATATAAAGATGTCTATGAAGTCTG
GCAGCAACCCACGAAGATAAACTGTGTGAGAAGCAAATCTCCCCAAAAGGCAAGACACGA
CGAAACCAGTATTGACAAGAAGGTAGCTTTTGTTCGTCAGAAGTTCATTGAAGCTAAATG
TTTATCTATAGATGGAAATCTTCGCCAGTCTAAGGAATTCCAAGAAGCATTGGACGTTTT
AAGTTCCAACACAGATTTATTTCTCAAGTTTCTGCAAGAACCCAATCCAATGTTTTCGCA
GCAGTTACAAAAGTTGAAATCTGTACCTCCTCCTCCTGAGACAAAACGAATTACTGTTCT
TAGACCAACAAAAATGGTGGATAATAGTAGATTTGGTGAATCAGGAAACAAAAATGAAAA
AGAGATGAAGAGAGCCACCCAGGTGGGTCAGGGAAACAGGGTAGACGAAAGCCATTGTCC
GATTTCCCCTCCTGCACCAGGGTGGAATATTGATGAAAATCCCGCTCAGCCGACAAGGAT
AGTGGTGTTGAAACCAAGTCTTAGCAAGACACGCAACTGCAGGGTTGCAAGTTCTCCACC
TTCAGCATCACCAAGAGTATCAGAAGCTGAAATGAAGTATGTAAACATAGAGGATAATGA
AGCACAGGATTCAGGAGAAGTGGCCATATCACAGAAGATGCATGAAAACCTTGGTGGACA
CAGAAGGGATGAAACCTTGTTTTCTTCTATGTCTTCCAATGGCTACATTGGTGATGAAAG
TTCATTTAACAAGTCTGAAAATGAGTATGTTGCAGGAAATCTCAGTGATTCAGAAGTCAT
ATCACCAGTTTCTAGGCACTCCTGGGATTACATTAATAGATTTGTCGAGCCTTATTCCTG
CTCCTCCTTGAGCCGTGCATCTTATTCCCCAGAATCTTCGGTTTCTAGAGAAGCCAAGAA
GCGACTTTCAGAGAGATGGGCAATGGTGTCTTCTAATGGAAGTTTTCCGGAACATAGACA
TCTGCGAAGAAGGTCCAGTACATTAGGTGAGATGCTTGCTCTTTCTGACACAAAGAACGC
TGGAGGAATGGAGCAGGAGATTAGCAAAGAAGAGCCCGGAACTTCAAATTCCAACTTGAT
GAATAATTCCAATTGTGATGAAGTCATTGATGAGTCACCAAGGAACCTCTTGAGGTCTAA
ATCTGTTCCTGTATCTTCGACTGAATTCGGTACGCTGTTGAATGCAGATGTTCCAGGTCC
TGAGACAGGAAAACCCAACCTTCCTGAAGAGACAACAAAACCAAGAAGCACAAAATTGTC
ACTGAAAAATCTGTTGTTCTCAAGGAACAAAAAACCAAGCAAAGACAGCGGACGCCATCT
GCAATCCAACAATGAAGTGCAGTCTGGTGTTAAGTCTTCACATTGTCCTGCAAAAGTTGA
TCCAGGACGTGAGTTCTCGTCAGCCGATCTTCACAAATCACCAGGCAAACTAGTTTCCCA
GAATTCGTTTGGGGAGCAAGGCATAATTTCTCCTGAGCAGGTTGGCCTGTTTGTATCAAA
ATCTTTGCCCTTGGAAAATCAATGTGAGAGCCAGGACCAACCAAGTCCAATATCTGCTTT
GGATACAACATTTGAAGAGGATGAACATCCAGCATGTATATCCTTTGGCAGGACGAAGCC
AGATCATCATGCAGGTGGTGAGTTGTCTGTTGACCCTATAAGGTGCAATCTGATTGACAA
ATCTCCTCCAATAGGATCAATTGCTCGTACTCTGTCATGGAACGATTCCTGCGTAGATAC
GGCCAGTTCAGTTCCTTTAAGACCATCCTTATCCACTTGGCGGACAGAGGAAGAAGAAAA
AGAATGGTTCTCTTCTGTTCAAACTTTATTAACGGTGGCTGGCCTTGATGAAGTGCAATC
AGATGCCTTCTTATTGATGTGGCATTCGACTGAAAGCCCTTTGGATCCATCTCTAAGAGA
AAAGTATGTTGATCTCAATGAGAAGAATACACTACACGAGGCCAGGCGAAGACAAAGGAG
ATCAACCCGAAAACTTGTGTTTGATTGTGTAAATGCAGCACTGATGGAAATCTCAGGATA
TGGGCCAGACACTTGCCAAAGAGCCATTCCCCATATTGGGGTTAGTAACAATCTTCCAGA
AGGAGCTAAATTGATATTGGTGGACCAGGTGTGGACCCGAATGAAGGAATGGTTTTCTAG
TGAGGTGAAATGTCTCTCTGGTGATGATGATGAGGACGGAAACAGCCTGGTGGTGGATGG
AATGGTGAGGAAGGAGGTTGTGGGGAAGGGTTGGCTTCAATATTTGAGGTTAGAGATAGA
CAATGTAGGAACGGAAATTGAAAGGGAGTTGCTGGCAGAGCTTGTGCATGAATCCGTCAT
TGAATTGACAGGTAGAGCGTGATAAGGCTTTTTTCCACTTAATTTTTGTTGCCCCAAATT
ATGTTATCTCTCCTGTATTTATTATGTTTGCCAACAATGCTGCAAACATTGTTTATATTG
CAATTCTGTAATGTTTTTTACATCTGGAATTGTTTTGCATTGTATGCTTCGGCTCTGGTC
TAGTTGTCATTTGTACAGTCTAACTAAACTAAGTAAGTTGAGTGCCGACACAAATGCAGT
TTCTTACACTTGACAATTCACCTTAGCTTGTGTTATG
