Microarray Probes on PGSC0003DMT400051115
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_45072_PI426222305 |
JHI_St_60k_v1 |
CAGAACTTGGAAGGAAAACATTTCAGTGTGATAACTCGTACAAATTCGTGTAATTGCATT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400051115
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400051115 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G14030.1 |
+3 |
1e-40 |
146 |
82/150 (55%) |
translocon-associated protein beta (TRAPB) family protein | chr5:4526878-4528253 FORWARD LENGTH=195 |
Transcript Sequence (1581 bp)
>PGSC0003DMT400051115 1581 pgsc_dm_v3.4
CACGTTTATATAATTTTCCATATTCATCTCCTCCAAAACATTTCCTAATGGCGACAGCAC
CATTGATAATCTTCACCATTTTTGCTCTTTTTGGAGTTTCCTCTTTAACTGCGGCAGCAG
AAACTCCGTTTGTGGTGGCTCACAAGAAGGCTTCACTCCTAAAACTCAAATCCGGTACCG
AACGGGTCTCCGTTTCCATTGACGTCTATAATCATGGATCTCTTGCTATATATGATGTAA
ATCTTACTGATGATAGCTGGTCCACAGAAATATTTGATTTCGTGGCTGGAAACACGTCCA
ATTCATGGGAAAAACTTGATGCTGGCTCTCATGTTTCACACACTTTTGAGTTGGAATCCA
AAGTGCAAACAACTTACTATAGTGCACCTGCTGTCATAACCTATCGCATCCCTACAAATT
CAAAACTACAGGTAGCATATTCCACCCCTGTTCCTGCACTAGAAACCTTAGCAGAAAAAA
CTGTTACCTACAAATTACATTTGGTAACTTTGCCCTCCTAACACAAGCATGAGATATGGT
TTCCTTATAATTGTTTTGTAAACATTTCTTGCTGTTCTGACTAAAGATTGTTTCTTCTTT
TACCAATCGGGCTGTTTTGGACTGGCTGGTCACTCTCAGGCAAAGGTAACTTGAGACCTC
TTCTTTATTCTATTCCATTTGTTCACTAATCAAAATCTCTCATCAGTTTCACGGGCACGA
AACAGAAAAAGCAAGTAAGGTTCTAATAAGTACCTTCCTGTTAGTTTGTAAGGGGAAGTT
GTTTCAGAAATTGATGTATATATGCTAGCAATTAAATTTACCTTATTCCTAAAACGAAAT
ATAGACATTGGTATAACAGGAGGCTGGGAGACCTCGAGCGTAATATACGCTACCATCGGA
GAGACTTTAGCCACATCTTAATCTGAATGAGGTGATCAAGAAAGTCCTCCCCTGGAAAAA
AAAATATACATCAATTACCTGTGCCCGGTCTATGGTCTAGTGGTAAGAGCACATCACGTT
ATGTGTGGTTAGGCATATGTCATGTGTTTGAACACTGCCGGAAACAAAAGTTTTGTATTT
AAATAGAGCAGAGTAGAGAGGCAGGCCCATTATCTAGCGAGTTTCAAATTGTGTGTCACA
ATCTCAAAGATTTCTCGGTTAATATTTTGTTTGCCAAGTTGATGTGAAAATCTCTTTTTA
ATGGTAGTTGTTTTCTTTGTGCAGAAGTTGCTTGCACAGTATGGATCCCATTTTTCTTTA
GGTCTCATCGTCTATTTGTTCGTGCGAATTATATTTAGTCCATCAGCTAAATCAAGTGCT
GGAAACGCAAAGAAAAGACACTGATCGTTCATCAGCTGTAGCAAACTTCTCTTTTGTAGA
GGCAAGGCCTCATACCTGATACAGAACTTGGAAGGAAAACATTTCAGTGTGATAACTCGT
ACAAATTCGTGTAATTGCATTTTGTTGAACTGAAATGTATTGGATGATTTCACTTGGGCT
ATATGAAATTTTCTAAATGTCTTGCTAAAAATATTTAAGTTACTTTAATTACATGTAAAT
CTTATTGAGATGCCTAATCAA
