Microarray Probes on PGSC0003DMT400051097
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_29790_PI426222305 |
JHI_St_60k_v1 |
TCTCCCGTGTAATTTGGCCTAGATCATGCCTCATGACAATGGCTTTCTCAAAACAGTAAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400051097
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400051097 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G25770.3 |
+3 |
1e-16 |
61 |
38/104 (37%) |
alpha/beta-Hydrolases superfamily protein | chr5:8969308-8971806 REVERSE LENGTH=421 |
Transcript Sequence (2724 bp)
>PGSC0003DMT400051097 2724 pgsc_dm_v3.4
CTTAAATGAATATGTGTGTATAGATATTTATACACAATTCTACGAGCTTATATACGTGAT
ATGTTTTATACTACACTCAGATATTTATAGCTTATATAACATATCACGTCATCCCCACCA
TCTCAAAATTGCTCGTCATTTAGAACCAGTTGGCCATGTAGCCACATATTTGTTAATTGT
GCTCCGTGTGGAGATGCAACAATGTCAGTGTTGGCCAGCACTTTCACCTGATAAAGGACA
TTGACATTATTTCAGTGATTCCCTGGATACTACTGAAGTTGCATGTAGTGTAATCTGAAT
CTTGCTGATGGAAATTTCTTGGTAAGATTTAGTTGTATTTATTCTCTGTAAAGTACTGCT
CCATTGAAATTTCTGGGGTTTACTGAATACTGATTGAAAGAAGGGAAAAATATGTACCTG
GTCGCAGAAAGATAAATCTTCTGACTGAACTATGTGCAGAATGCAGCCTTCAACTCGGGC
ACATTCCTTTGCAAATATATCAGTCAGAGCAGAATGAGCGAGAACCTCTTCTCATTAATA
GTGTAAGTCTTATAATTGGAAATTCTCTTTCATTCATCTCTCTACCTTTGACTGCAGGAT
TAAGGTCACAGTAGCTCCTTGCTTTGCAGCGCAGAACGTCGGACCTTAAGCTTGTTCTCC
CGTGTAATTTGGCCTAGATCATGCCTCATGACAATGGCTTTCTCAAAACAGTAAGGGGCT
TCTCTAGTGGGAAAGAATGGTATCTCGAAGAAAAGAGGAGGAGGGATTGGTGGAAGAAAA
GCACTTAATGATATCTCAAAGCCTTCTGCTCTACAAGCATCAAAGAAAAATAATTCCTCA
AATGTGAGGGAAAGATCTTGATTCCTCTAGAAACAAATATAGTGCAGGAAGAAAAGATAA
TTATTCTAAAGTTTTGGAGAAAAAGGGTGGCAGGAAAGCACTAAACTGATCTTACAAAAC
TCAACCAAGTCGTCATCTGTTGCAGAATCAGAATTGTGTCAAAGCACAGAGAAAGGCCAT
GGACATGAGTTGTTTTCTCAAGGAAGTTGGATTAGATCATGATGATGTCCCTGTGCATCT
AGGAGCATCTCCACATGCACTTGAACTATCAATGAAGTCGAAGTCATCGACATATTAGCC
AGAAAGCCCAACTAAGCATTATGTCCAAGTGGAAGAGCTGCCAGAACTGATCTTTTATGA
TCAGGTCTGTTGTATATCTTTTTCCCCTTGTGCTGCATCTCCTAAATCAGTAAAGCCACG
ATATATCAGCTGGCCGGATGACGGTGTTCTAGATTTTGCATTGCTATGGAACACCTATCC
ATTCAAAGTATTGATGGACACTACTTTAAACTCAAGGATCACTAGCAGCCCTTTGAAATA
TATCCGTTGTAGTCATTGGCAACCATGTACATCCAAGATTGTAAGCATTAAGAAGAACAT
TTCTACTTGCAAGAGTAATGTTGTTCTGCCAAGCAGCAAAACTTGTTTCTATTCAAAGAA
GTGAGGCAATTCTGCCTAAGATCACTGCCATTCATGTTCCTGCAACTTGCAGCATGGTCA
TTTCTCCATCTCACTCAGATGAATCATTAGTATCCATGGATGAATCTATGTCAACTTCTG
ACACAGTGAGAACTCCAGAGGTTGAATACATAGATGACATGAATTGGCTGCAGTTGATTC
CATCGAGAAGAAGGCGTGTAGCACCCTCTACATCTCAGAACATGTCAAAGCAGCAGTTAT
ATGCAAGAGAGATTTACTTGTGGACTTGGAATCAGGGGATAAAATTGTCAACGTTGATAA
ATTATGCGCTACAATGGGCCTGCGAGGAAGGAGAGCAAGGGCAGTTGCCTGTCTTGGTAT
TAAGCATGAAGGAAACTGATAAGAAAAAGAGGCCAGCTTTTGTCTTCCTACATAGTACAA
ACAAATGTAAAGAGTGGTTACGGACGGCCATTACTATAGGCATATGCTTCGAGGGGATAC
ATAGCTGTAGCAATTGATTCTCGATACCATGGACACCAATATGACAACATATCGTGATGT
AAGAACAGAATTGTGGTTGCAAATTTTAAAACATTATAGAGCATGATGGATGTTGTCAAA
TAACATAGTTGTTTCTGGAAATGGGTTGGTTGGAAATGGAGTTCACCAACTTCCAAAAGT
TGTTGCTGGCATACCCAATGGGATGCCTCATGCAAGTTCCACTAATGAAGAACAGAGGAG
TTTCCAGAGCACTATCATATTGACTGATAGTGAAACAGTTCGATCTTATGTCCAAGAGGT
CAATAATGAAACTACAATTACTGTAGAAAGCAATGTTGGTGTCAGTTCCAAGGTAAGGAA
GTTTTTCCTGAGTTTTTACTTACCAAGGACAAGCCCAGAGATTGAGGCTAATGCGAGGAG
GAAAATCCTGACATAGATTAGATATTAGGAAAAATACTAATGAAACCTTTAATGGGCTTG
GTTTATCACTACTGCTAATGGTCTTCTTGCCAAAACATGGTATTGTATATAGGTGAAATA
TCATTTTATTTGTACACTTGTTCAATCCCCTGCACACTTGCTAGATAGCATGAAAATCCT
TGCTCCACCACTATAGTCTTCTTCTTTCCTTGTGGTCAATTATGAAATTATATTGGTAAA
TGATAATACTTTATGCAATTGCAGACATTGAACTACCAGTTGTTGAAATATATTTGGGTA
TTATATATATTGCCTTTATCCCTG
