Microarray Probes on PGSC0003DMT400050472
Probe ID | Chip | Probe Sequence |
---|
CUST_38451_PI426222305 |
JHI_St_60k_v1 |
CTATGGGAGCCCCTGCTTGCAGATATAATTATAATTAGATATTCTTGCACAAGTTCAAAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400050472
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400050472 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT3G49260.3 |
+3 |
2e-43 |
115 |
95/304 (31%) |
IQ-domain 21 | chr3:18262755-18265859 FORWARD LENGTH=472 |
Transcript Sequence (1592 bp)
>PGSC0003DMT400050472 1592 pgsc_dm_v3.4
CTGGTACATTCTTTCTGCAGAATACCCCACTTATTAATTCTTCATTTTTCTCATTCATAA
TATATTATGGTACACAGAGATCATACTCCCATGTTTTTTTTTCCTTTTGATTAATTCATT
GCTATTTTTTTTCTTTTTCCAATATTCTGAATTGAATGTTTCCAGGCAGAAAATAAATTT
ATTTGGCTGAAAATGGGGAAGAAAGGAAGTGGTAGTTGGTTTTCCACTGTGAAGAAAGTC
TTTATTAAACCTTCTTCTAAGGATTATTCACCAGCAGATCATAAAAAGAAGGAAAAATTA
GAGAACCAATGGCAAGATGAAGCTCCAGAAGTTGAACAATTTCCAGCAGAGAGTTCTTCA
GATCTTACCAATAATCGAGAGAGCAATGACAATTCATCATCTTCGTTGGCTGAAGATCGA
AATCATGATATTCATGTCATCGAAGCCAGTGTTGCGGTAGCAACTTATACGGCCCCAAAA
ATTGTGAAATTAGATGGATACAACAAAGAGGAAATTGCTGCCACCCTTATTCAATCATAT
TACAGGGGATATCTGGTAAATTAAAAGCCAATCATCCATCTTATATATAAGTAGTGTTCA
AATATACATTTTGCCTAATTTTGCAGGCAAGACGTGCTTTGCGTGCCCTGAGGGGATTGG
TGAAGCTGCAAGCGCTAGTGAGGGGGCATAGTGTGCGGAAACAAGCGCAAATAACAATGA
GATGTATGCAAGCATTAGTACGGGTACAGTCAAAAGTACGTGCACGAAGACTCCAGTTGC
TGCAGAGCAAAGTGGAAGAAGTAAAATTGCACTCGATTATTAGAGAAGACCAGCACAAGA
ACAAGAGCCTGTCTAACAAACAAGAGACAGAAGGCTGGGATAACAGGAACCAAAGCATTG
AAAAGATCCTACAAAACACTAGAAGAAAACAACACGCTTATCAGAAATGGTTGCACTCTG
ATCCAGATGATGATGAAGAATGTTTTTGCAATGAGCATGAAAATCCACAACAAAGTTGGA
ATTGGCTTGATAGATGGATGGCTTCTCAACATGCTGTGCGACGAGAAGGCTCCTATGTGT
CATTGTCCATCACAGATGACATATCAGAGAAGACAGTAGAATTGGACCCATTGGGCTCAG
AAGATGTCAACTTAGCCCATCACATTCTCAGTCCAGTTGAAAGAAGCCCATATTCATCCA
CTCAGTCCAACATGGATTCTGTCCCTAGCTACATGGCTCCAACTAAATCTGCAAAAGCAA
AAATAAGAAGCCCAGGCCCAATAAAACCTAAAAGCCCACCAGGAGTGGCCCAATGGAATG
CAACACCGAAGAAGGTGACAGCCCGTAGGTGGAGCTATGATTCATCTGCGAGAAGCCCAA
ACCCAAAAACTTCTGCTAAATGGATGGCAACCTATAGCCCAGAAACACGTGTACACGACA
GGGCCTCACCTATGGGAGCCCCTGCTTGCAGATATAATTATAATTAGATATTCTTGCACA
AGTTCAAATAAATGGTTATTTTAAATATGCAAATGTTATGACATAATTATATATGTTCAG
TACACTAGAAATAAATCTTCATTTTCTTCTTG