Microarray Probes on PGSC0003DMT400050450
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_38467_PI426222305 |
JHI_St_60k_v1 |
GACTTGAAGTCCTAAAGTCTATCAATTTCATGTCGTACTTACCCTTGAATTCTCCTTTTA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400050450
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400050450 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G11410.1 |
+1 |
2e-60 |
208 |
149/356 (42%) |
protein phosphatase 2CA | chr3:3584181-3585649 REVERSE LENGTH=399 |
Transcript Sequence (1757 bp)
>PGSC0003DMT400050450 1757 pgsc_dm_v3.4
CCCTAATTTAATTCTCCAGAAACGTATAGTTTCTGCTTAGCATCCCTTGATCAGTGTAGC
AGTTTTTTTTCGACGCTCAATTCCATTGCTTTAATTATCACCTTATCCAAAACCTTTTCA
GATTCTTCCCTCATCTATATAAATTTGTTTCTCTTTGTTGTGACTCATTCAAATACATCA
GGTGCAATGGAAGATTTTAATCTCAATGCGAAACAACAAAAGTGCTCTCGTCTTAATAGT
AGTCAGCAATTGAAGTGATTGTGCATGACATTAATGCCTGACATCTCTAGCACTAACGCC
AATGTTGTCGTAACCAACTATAAATGCTATAAAAAGAAACGAAATCAGAATATTGGAGTA
ACGAATGATGATAATGATGAGAAAACCAGAAATGGAGAAGAATACAGAGAGAAAAAAGAG
ATTGTAGTGTCTATGTTATTCACCATGAGTAAGACAACTTCTCATCATCAGCAACAACAT
TCAGAAAACAGTGTCGTTTTGACCAGAACTCCCAGTAATGTCGATGAAGTGAGCAAGGAA
ACAGAGGATTTACAATCCATTACGAGATATTCACATGGATCTATCTCTTTGATCGGTGGA
AGAAGACAAATGAAGGATGCTCTATCAGTGAAGCTGGATTTATTGACGAATTATGACTTT
TTTGGTGTTTATGATGGACATGGAGGGTCATGTGTAGCTCATGCCTGCCGTGACTTGTTG
CACAAGGTACTGATGGAAGTAATTCTTGAAGAAGATGGGAAATTTGAAGAAATAAATTGG
GCGAAAGTGATGATGACGAGTTTTTATAAGATGGATAAAGAGGTGAACAGGATTAATGGG
GCGGAAGTGGCGACAATTGGATCAACGATAGTCGTGGCGGTTGTGGGGAAGGAAGAGGTA
ATAGTTGCCAATTGTGGGGATTCTAGAGCTGTGCTTTCACGAGGTGGAGTTGCATTGGCC
TTATCTAATGATCATAAGCCGGACAGACCTGATGAACTGGAGAGAATTGAGAAGTCAGGC
GGGAAGGTCATCAATTGGAATGGGCATCGAGTCCTAGGAGTACTGGCTACTTCAAGATCC
ATTGGTACGTCCAGATTATGTTTCATATCGAATCAAAATTAAATGATCATGTATTCTAAT
TTCTGTCTAGGACACACCAAAAAACGAAGACGTAAGCTTACATATAGAATTTCTGTATTC
TTGAATATTCAATGTGACAAAAGAGTTAATGCAAGGGATAACTACCTAAAACCGTATGTA
ATACCAGAGCCAAAAGTCACAGTGAGCAAAAGAACGGATGGAGATGAGTTCTTAATACTT
GCCAGTGATGGTCTGTGGGATGTTGTTCCCAACGACGTTGCTTGTGATTTTACAAGAAAA
TGCTTAAATGGTCAGATTAGAAGGTGCAAAAATGGAAGTGAGCATTCTCAAAATAAGGTC
ATGAAAGAAAATGTTGCAGCGAAGGCAGCAACCTTACTCGCAGAATTGGCGATTTCACGG
GGCAGTACAGACAGCATAAGCATCATTATAGTTTAGTTGAAGAAATCTTTAGGCACCAGA
GATGGAAATAGTATTTATAGTTCACTACTTTGATAGTTCATTTTTTCTCTCTTTATAAAT
TTCTTGCTTTGTGTCCATTATGGATTGTTTGTACTTTGTATAATATTGTACCTGGACTTG
AAGTCCTAAAGTCTATCAATTTCATGTCGTACTTACCCTTGAATTCTCCTTTTATATATA
TATTCCGTCTTTTAATT
