Microarray Probes on PGSC0003DMT400050270
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_45797_PI426222305 |
JHI_St_60k_v1 |
TAACCTGCCGGTGTGGATCTCAATTTTGCTATATATGTGGAGAAACATGGAGCGAAAGCC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400050270
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400050270 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G14250.1 |
+3 |
6e-64 |
210 |
98/268 (37%) |
RING/U-box superfamily protein | chr3:4745963-4746958 REVERSE LENGTH=303 |
Transcript Sequence (1211 bp)
>PGSC0003DMT400050270 1211 pgsc_dm_v3.4
TTCGCATTGTTATCCAATTCAATAATAGAACACTATAAAACCCCTTTGCATACATCAAAA
TCAAATCAAGTAGTATCACAAATCTGCAAAGTTCTCCAAGAAATCTTCAAACTAACTAAC
CACTGATCAATTCAATGGCAGACATAATATCAAATGTGTTTAATGAAAACGATGAGTTTC
GCGCTCTCATACTATCAGACAAGGAGTGCGCGGAGGAACTGCAATACCAAGAGGTTCTTG
CAGCCTCTTTAGAAATCTTCCATCTTCACATGTCATCAACACAAATCGAAGAATCCCCTG
AATCATCCCAAGGTTTTTGTGACATTTGTATGGAGACAAAAGTTACAAATGAAATGTTCA
AACTCGAAAATTGCTCTGATCACTCATTCTGTACTGATTGCCTAGCCCAATATATCCAGT
CCATGATTCAAGACCATATTTTCTCAGTAACTTGCCCTGGTTTGAAATGTTGCGCGACAA
TTGAACCTGTTTCTTGTAAATCCATCATCCCAGAAAATGTATTCGAAAAATGGGAAGGGG
GATTGAGTGAGTCTGCTCTTCTTGATTGCGAAAAATTCTATTGTCCTTACAAAGATTGTT
CAGAGCTGCTGATTTATGATCATGATCAGGACATAATTGAGTGCGTATGTCCTGTATGCC
ACAGGCTGCTCTGCGCGGCGTGTGGCGTCCCTTGGCATACTGGATTTGATTGTGACAAGT
TTCAAAATGATGAAAAAAACAGAGAAGATGATTTAAAAGTTGAGGAACTTGCTAGCAGCT
CCAAATGGATGAAATGCCCTCACTGCAAACATATTGTGCAGAAAGCTGATGGTTGTATAC
ACATAACCTGCCGGTGTGGATCTCAATTTTGCTATATATGTGGAGAAACATGGAGCGAAA
GCCATTGGAGTTGTCAAATTAGTGAATGATACCGGATTGCTTCTAAAGAACTGGGAAGAT
TGAAAGAAGGGTAAATTATGCTAAGTGGCCATTCGGCCCTTTGCGACCAAAATTAGCAAA
AAAATGTTGTTCCGTCCTTCTTCAACTTTCGACTTTGAATGTATTATAATGTTTAGTCAT
TGTAAACATAAGTTTGTATTGTATACTTTTTATGACTTTCGGCAAGTTAAATTGTATAGT
CAGTGTACATTTCCTATAATTTTTTAGTATTTTTATTTAATGTAAATAAAGCATGATAAT
ATTTATTGTAA
