Microarray Probes on PGSC0003DMT400050017
Probe ID | Chip | Probe Sequence |
---|
CUST_17328_PI426222305 |
JHI_St_60k_v1 |
AATGGAAATCATCAAGGCCATCTTATTGTGAACTACCAGTTTGTTGATTGTGGTGATAAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400050017
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400050017 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT3G04720.1 |
+3 |
5e-90 |
267 |
125/174 (72%) |
pathogenesis-related 4 | chr3:1285691-1286531 REVERSE LENGTH=212 |
Transcript Sequence (672 bp)
>PGSC0003DMT400050017 672 pgsc_dm_v3.4
TTAACTCTTTCGAGAAAATGGTGAAGCTAATTAGTAATAGTACTATTTTGTTATCTTTGT
TCCTCTTCAGCATCGCCGCAATTGCCAACGCACAGCAATGCGGTAGACAAAAGGGCGGTG
CCTTATGCAGCGGCAACTTGTGTTGCAGCCAATTCGGGTGGTGTGGGTCAACACCCGAAT
TTTGTTCACCTAGCCAAGGTTGCCAGAGCCGCTGCACTGGTACTGGTGGATCAACCCCAA
CTCCATCTGGTAGCGCCCAAAACGTTCGTGCAACGTATCATATATACAACCCGCAGAATG
TTGGGTGGGACCTGAATGCTGTTAGTGCTTACTGCTCAACTTGGGATGCTAATAAGCCTT
TATCCTGGCGGAAGAAATATGGTTGGACTGCTTTCTGTGGTCCAGTCGGACCTCGTGGTC
GAGACTCCTGTGGCAAGTGCTTAAGGGTGACAAATACACGTACAGGAGCTCAAACGACAG
TAAGAATCGTGGATCAATGTAGTAACGGAGGACTAGACTTGGACGTTAACGTTTTTCGAC
AAATCGACACAGACGGAAATGGAAATCATCAAGGCCATCTTATTGTGAACTACCAGTTTG
TTGATTGTGGTGATAATTAATCTTATAGTTGACACAGAATTATAAGATTCATGTTTGACT
ACCCAAATAAAT