Microarray Probes on PGSC0003DMT400049998
Probe ID | Chip | Probe Sequence |
---|
CUST_17239_PI426222305 |
JHI_St_60k_v1 |
AAGAGAAACAGAGAGCAAAACTTGCAATTTCTGGGGTGAAGAAAATGGCTACACTGAGAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400049998
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400049998 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT2G38760.1 |
+2 |
2e-134 |
392 |
192/321 (60%) |
annexin 3 | chr2:16201086-16202490 FORWARD LENGTH=321 |
Transcript Sequence (1177 bp)
>PGSC0003DMT400049998 1177 pgsc_dm_v3.4
GGGAAAAATAACTGAAAGTGTTAAAGAGAAACAGAGAGCAAAACTTGCAATTTCTGGGGT
GAAGAAAATGGCTACACTGAGAATCCCAGATGTTGTTCCTTCTCCAGATGAAGACTGTGA
AACTCTTATGAAATCCTTCAAAGGACTGGGAACTAATGAGAAGTCAGTGATATCGGTGTT
GGGCCAGAGAAATGCAAGCCAGAGGAAGAAGATCAGAGAAACCTATCAGCAACTTTACAA
CAAGTCCCTTATAGATGACATTAATTCTGAATTGTCTGGTGATTTCAGGAAAGCAGTCAT
CCTATGGACATACGAGCCTTCTGAAAGAGATGCACGGCTAGCAAATGGAGCCTTAAAGTC
AAGAAAGAAAACCATCACCCAGTTGCAAGTGATAGTAGAGATAGCTTGTGCATCATCTCC
TGATCATCTGGTCGCGGTGAGACAAGCATATTGTGGCCTTTTCAACCGTTCACTTGAAGA
AGATATCACAGCAAATGTCCCTATGCCTATACAAAAGATTCTTATTGGTCTAGTCAGGTC
CTATCGATATGATAAAGAATTGGTGGATCCTAGTACTGCAAATGAAGAAGCTGCTATCCT
TCGTGAAGCCATACGGACAAAACAGTTGGATCATGACAATTTTCTTTTCATACTCAGCAC
AAGGAGTAGTTGTCAGCTTAGAGCAACTTTTGAGTGCTACAAGCAAAATTATGGATTCTC
CATTGACCAGGACATTAAGAGCTGTGGAAAAGGTCTATTGGAATCTATCCTGAAGGTGGT
TATCTGGTGTATTGATTCGCCAGAGAAACATTTTGCTGAGGTTGTCAGAGCCTCGATTGT
CGGTTTTGGAACTGATGAGGATTCTCTAACGAGAGCCATTGTAACTCGAGCTGAAGTTGA
TATGATGAAAGTAAGGGGAGAATATATCATAGCGAACAAAACTAGTCTTGATAATGCAGT
TATTGATGACACATCAGGTGATTACAGAAAATTCCTCATGACACTGCTTGGTGCCAAAGT
GTAGACCTGACCATTATCTTGTTGTGTTTCAATACTATGCTACTACTTTGTATGATTTAT
TCGGAAATGCTATATGCGCATTATTGGGGTGGTTTTGCAGTGAAATGTTTAATAATTGGA
GAGTGAATTTGTATATAAGTTTGTGGTTTGTCACTTG