Microarray Probes on PGSC0003DMT400049671
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_37680_PI426222305 |
JHI_St_60k_v1 |
GCTATTGTTTGTTGCTTCTGCGGGGCTGTTCTCAAATCTTACAGATAATAATAACAATAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400049671
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Source Transcript PGSC0003DMT400049671 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G52855.1 |
+3 |
8e-35 |
118 |
46/68 (68%) |
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15534.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr1:19683137-19683343 REVERSE LENGTH=68 |
Transcript Sequence (398 bp)
>PGSC0003DMT400049671 398 pgsc_dm_v3.4
CAACAATTACGTTTCTTGGTGGAAAAGTTGCTAAATTCTCTACTTCTCTAATTTGATCGA
TCGATACAATATAATACGATACGATGGTTTGTTTTTGCTTTTTGGTGGATCAGAAGAAGA
TGATGAGGCAGAGTAAGCCCGTGGCCGGTTCGTGTTCACGTTGCGGCCACGGAGCTCAAG
TTGCTCATATGCGGACCGCTACCAGATTTTGTTACGTTCCATTTTACTGGAAATCTTGGA
AGGCTATTGTTTGTTGCTTCTGCGGGGCTGTTCTCAAATCTTACAGATAATAATAACAAT
AATATATATGAACCTATATATAGTAGCTATAATATAGAAACTCAGAACTATATATATAAG
TTCTCGAGCCATCAAGATAAAAATTCTAACTTCGCAAC
