Microarray Probes on PGSC0003DMT400049666
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_37640_PI426222305 |
JHI_St_60k_v1 |
CATGATTATTGAGGTGGAAAGGGCATTTATTCTTTGGTTGGCGACTAAAATAGCAAAAAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400049666
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400049666 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G15500.1 |
+3 |
2e-94 |
293 |
132/151 (87%) |
NAC domain containing protein 3 | chr3:5234731-5235882 FORWARD LENGTH=317 |
Transcript Sequence (1567 bp)
>PGSC0003DMT400049666 1567 pgsc_dm_v3.4
CACAATTTAAGAAATTTCAGAGAATCAAAATTTATCTTCTCTCCAATTTCCTAAAAACTT
GCAACGCTTTTCTTCTCTCTCTACATTTTGCTTACTTGTAAGAAAAAATGGGTGTTCAGG
AAATGGATCCTCTTACACAGCTAAGCTTGCCACCCGGGTTTCGGTTTTACCCGACTGATG
AAGAGCTTTTAGTTCAATATTTATGCCGTAAAGTTGCTGGTCATGATTTTTCTCTGCAAA
TTATTGCTGAAATTGATTTGTACAAATTCGATCCATGGGTTCTTCCAAGTAAGGCGATTT
TTGGAGAAAAAGAATGGTATTTCTTCAGTCCAAGAGATCGGAAGTATCCAAATGGATCTA
GACCGAACAGAGTAGCTGGTTCTGGTTATTGGAAAGCAACTGGAACTGATAAAATAATTA
CTACGGAAGGTAGAAAAGTTGGAATCAAAAAGGCTTTAGTGTTTTATATTGGTAAAGCAC
CTAAAGGAACTAAAACGAATTGGATTATGCATGAATACAGACTCAGCGAACCTACAACGA
AAAGTGGAAGTTCAAGGGTATATACCTTATCACCTCATAATTTGAAAATTTAGCCTGAAT
TTGACATTAATAGTTATTTTCTTTTGTTATGTTTTTCAGCTCGACGATTGGGTTCTATGT
AGGATTTACAAGAAGAATTCCGGTGGGCAAAAACCGAGTTGTTCTGATTTACAGAGCAAG
GATATAAACCATGGTTCATCATCGTCATCCTCGTCTCAATTTGACGATATGCTGGAATCT
CTACCAGCAATTGAAGATCGATATTTCTCATTACCTAAAGTGAATTCCATTAGGAATTTT
CAACAAGACGAAAAGCTCAATCTTCAACAATTGGGTTCTGGGAACTTTGATTGGGCCACT
ATAGCGGGATTGAACTCATTTCCGGAATTAGCTTCCGGAAATCAAGTTCCAGCACCGGGT
AATCAAACTCCGGTGCTTATGAACACAAATCAGTATCACAATCACAACAACAATTTGAAT
AATTTCAATGAATTTTTCGCCAATTCAACGGCGTTAAATTTTCACAGCGAAGTTAAGTTT
GAAGGAGGAGTTGATCAAGAAGTAGAAAGCAGTGTTAGAGCTCAACGACTTAACAGCGTT
AACCCGGGTTTCTTCCAAGAGAACTCAACCGGGTTTCCGAGTTCTTATACGAATTCGGTG
CCCGACCCGTTTGGGATTCGGTACCCGACCCAAACAGTAAATATGGGTTTTACTGGGTAA
ATAGTGGAAGGGTAAAATGTGAATGCTCATAGATTAACTTGAAGACAATTTGGAAAAAAT
TGTCATGATTATTGAGGTGGAAAGGGCATTTATTCTTTGGTTGGCGACTAAAATAGCAAA
AAAAAAAAAAAAAAAGTTAACAAGATTTTGTTCATGCAATTATGCACATATACAATGTAT
TTTGTTGTACTAAAATTTAAGGCTTTGGTAATGGTACTTATAGGAATACAAATTGGAGGA
TTTGATTAGCTAATTTTATTTTGTTGTTGTAAACTTTTAAGACCTTAACGCGAATTTGTT
GTTTTCT
