Microarray Probes on PGSC0003DMT400049641
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_37641_PI426222305 |
JHI_St_60k_v1 |
GTATATAGGTTGTGTGAGACTGTTCATGTTAGATTCTTCATCCTTTTCTTCTTCTTACTG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400049641
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400049641 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G27350.1 |
+2 |
4e-114 |
340 |
162/284 (57%) |
Protein of unknown function (DUF1223) | chr4:13690979-13692621 REVERSE LENGTH=278 |
Transcript Sequence (1313 bp)
>PGSC0003DMT400049641 1313 pgsc_dm_v3.4
TTTTCCTCTCCACCATCTCTTCGTATTTTTACTATTCTAAGCTTTCCATTTTCATTTCTC
ATTTTTTTTCTTCAGTTCGAAAACCCCATTAAAACATTGTTTAATTTCTGAGAAATATAT
TCCATTACAATTTTCTCCATTAAAGCTTTAACGAATCACCAGGTTTGAGACGACTCGTCG
GAAAATGGGGCGCCGTCTCTTCACCTGCTTCGGCAAAGGCGGTTCTTCTCAATCTTCTTC
GAAAGATCCCAGCTCAAGTAATAACGACAGTGCGACGGCGGATTTAACGGCGGAGGAGCA
AAAACGGTGCGGGCCGGTGGTGGTGGAGTTATTCTCATCACAAGGCTGCGCCACCTCACC
TGAGGCGGAGCTATTGTTTTCGAGGATTGGGAGAGGCGATTTTAACCTAGAAATGCCGGT
GATTTTGTTGGCTTATCATGTGGATTATTGGGATTATATGGGTTGGAAGGATCCATTTGG
GTCGAGTTTATGGACGGTTAAACAAAAAGCGTATGTTGAGGCCTTAAATCTAGATACTAT
GTTTACGCCTCAAATTGTGGTTCAGGGACGAGCTCAATGTGTTGGGAATGAACAAGATGC
TGTTTTCTCTTGTATCAATTCTGCTCCCAGATTTGCTGCTCCTTCATTCCAGGCGACATT
CGAGAGGCCAACACCAGAGTCGTTGCAAGTATCTCTATTAGGATCTCTGAGGAGTAAGGT
GGACAATGATGGTGCCAACGTGATGATTGCTCTGTACGAAGGTGGTCTGGTCACTGATAT
CGCTGCAGGAGAGAACAAAGGAAAAATGCTTGCGAATGACTATGTTGTCAGGAGGCTGGA
TAAGCTTTGCTCTGTAAAGGATATTACTGCAAAGAAGACAATCTCAGGAACTGTCAACTT
CTCTCTTTGGGATGGCTTCAATAGCAGCAAATGTGGCGTAACGCTCTTTGTGGAAACTGG
CTCTCATCAAATATGTGGATCACAAAACTTTAAATTGCCGGAAAATCTCTGAATTCTTGG
ATGATATATCACTGATTGAAACTCTTGATGTGCTGGTTATAGGTTGGATTGCTTGTAGTG
CACGTCTCTGATTAAAATCAAATCTGCAAAACATTCTATATACCAGCTTGTTCCTTGTGT
ATATAGGTTGTGTGAGACTGTTCATGTTAGATTCTTCATCCTTTTCTTCTTCTTACTGTT
CATTCCTTTGCTTTTTTTATAAACGGTTTGACATATAGTGATTCTTTCCTTGTACTATGT
AATTGGATTATTAGAAATTGCGGCTAGAGATATTTTAGTGTAAATGCTTTTCC
