Microarray Probes on PGSC0003DMT400049622
Probe ID | Chip | Probe Sequence |
---|
CUST_37657_PI426222305 |
JHI_St_60k_v1 |
CATCCTTGTCGATTGTGAGTGTCATTCATTTCTCAGAATTGTATTAAAATCCTCCCTTTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400049622
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400049622 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT4G21380.1 |
+3 |
0.0 |
395 |
226/483 (47%) |
receptor kinase 3 | chr4:11389219-11393090 REVERSE LENGTH=850 |
Transcript Sequence (3037 bp)
>PGSC0003DMT400049622 3037 pgsc_dm_v3.4
AAAAAATGAAGTCTTGGTAATCTCTGAGACAATCTTACTGAAAAGAATACCACAAGAGAT
GGAATATGTTAAATTCTTTTTAACAATTTTGAAGAAGAATGCAATGCAACAAAAGGTAAA
TATAACTATCATGGATATAACAATATTTCAATTTATTCTACTTCTCTTGTATTTTGTGTT
TCTTCAAAATGTTAGTGGTCAAGGAGATACCATAACTACAACTCAATTCATTAAACATGG
TGATACTATTGTTTCGTCTCATGGAACGTTCGAGTTAGGATTCTTCAGTCCTGGAGATAC
TTCTACAAATCACTATGTTGGAATATGGTACAAGAAAACCTCTGCTACTACTCCTGTTTG
GGTTGCCAATAGACTAGCTCCTGTTGCTAATAAGTATGGGGTGTTGAAAGTTATTCAGCC
AGGTCTGATTGTACTTCTGAATGATACTAATGCAACTGTTTGGTCCACAAACTCATCGAA
ATCTGTACAGAATCCTGTTGCTCAGTTGTTGGACACAGGGAATTTTGTGGTGAGGGATGC
TAATGATCCGAATCCAGAGAATTTCCTCTGGCAAAGTTTTGATTATCCTAGTGATACGTT
GTTGGAAGGTATGAAACTTGGGACGGACTTGGTGACTGGATTAGAAAGGTATCTTACTTC
TTGGAGAAGTAGTGATGATCCTGCTCCGGGGGATTATACTTATCATTGTGATCCTACGGG
TTATCCACAAAACCTTATGCGAAAAGGGGCTAATGTGACGTTTAGAGCAGGGCCGTGGAA
TGGTATCAGGTGGAGTGGTGCACCAAATCTGGTAAACAACTCTATCATTTCTTTTGGCAT
GGTTATGAATAGTAGGGAAATTTACTACAAGTATGAGATGGTGAACAAATCCGTTATTTC
AACATTTGTTTTAGAGCCTTATGGGAAAGCTATGCGTATCATTTGGATTGGAAAGGTTCA
GGGATGGGTAAATTACCACTCTGCAGTTGTGGATGACTGTGACACCTACAAATTATGTGG
TGCATATGGGACTTGCAACATTTTGAGTGATCCTTTTTGTCAATGTTTAGATAATTCGAG
CCAAAACATCCTGATAATTGGGAAAGGTCTGACTGGTCTAGTGGTTGTGTCCGGAAGATC
CCACTGAATTGCACAGGAGATGGATTTATTAAGTATTCTGGTGTTAAACTGCCTGATACG
CGAAATTCTTGGTTCAATGAGACAATGACACTAGATGAATGCAGGGTAGTTTGCTTGAGA
AATTGTTCGTGTACGGGTTATACTAATCTGGATATACGCAAGGAGGAAGGGGGTGCTTGC
TATGGATTTGGGAGCTGGTTGACATCAGACAGCTACCTGCATCAGGACAGGATATCTACA
TTAGGATGTCTGCTTCAGACATAGGTTCTGCTGGATCAAAAGGAAAGATAGCTTTCATAC
TTGCAATAGCTTTGCCACTATTGGTTGCATTGATTCTGCTTGGTTTAGGTGTAGGCCTGA
TTCTTTGTAAACGAAAAAGGAGAAAGGATCCGGTGGTTACAACAACAGGGAGATTAGGTG
GTCACAGCAACAAGAATGATAACAGTAATCAAATTCACGAGGAAAATTTTGAGCTTCCAC
TTTTTGACTTATTAACGTTAACCAATGCTACCAACAACTTTTCATTTGCAAACAAGATTG
GAGAGGGTGGCTTTGGACAAGTTTACAAGGGTGTATTAGAAGGTGGACAAGAAGTAGCAG
TGAAGCGGCTTTCAGAAACATCAGAGCAAGGACTTCACGAGTTCAAGAATGAAGTTAAGT
GCATCGCAAAACTTCAGCATCGGAATCTTGTAAAGCTTCTAGGATGCTGCATTCAAGGAG
AAGAGAAGATGCTGGTGTATGAGTACTTGCCAAACAAAAGCCTGGAATTATATATATTTG
ATGAAGAAAGGAGTGCATTACTTGATTGGCCTAAGCGCTTCAATATTATCAATGGAATTG
CTCGAGGACTGATGTATCTTCATCAAGATTCTAGGCTCAGAATCATCCACAGAGACTTGA
AAGCTAGCAATGTCTTACTTGATATTGAAATGAATCCAAAAATATCCGATTTTGGGATGG
CTAGAAGTTTCAGAGGAGATGAGACAGGAGACAATACAAGCCGTGTTGTTGGAACATAGT
AAGATTTAATATTTGATTATATATGTAGTCATGAACACATGGTGCATTATATAATCCTGT
AGTTTCTTTATTGCAGTGGTTACATGTCCCCGGAATATGCAGTCGAGGGGATATTCTCAG
TGAAATCAGATGTCTTTAGCTTTGGGGTATTAGTACTAGAGATTGTGAGTGGAAAGAAGA
ACCGACGATTTGTTCATCCAGACCACCACTTCAACCTTCTTGGACATGCATGGATGCTTC
ATAATGAAGAACGGACGTTGGAACTAGTAGATCCATATCTCGTAAATTCATACTATATAT
CAGAAGTACTAAGATCAGTCCATGTGGGATTGTTATGTGTTCAACAGAATCCAGAGGACA
GGCCAAGCATGTCAACTGTGATTATGATGCTGAGCAATGAAGGCATTTTACCACTGCCTA
AACATCCCGGTTTCTTCACTGAAAGGAAAGTTGAAGGTCATGATCAATTATCTTGGAGTA
CACAAACACCAAGTTCTATAAACGAAGTTACCATCACGCTGTTGAATGCTCGATAGAAGC
ATATCATGGCCATAGTCAGTGGCAAAGCCAGGATTTTCACTAAGGGTTTCAAAATATGAA
AGAAGTAAACACACAAAGTCAAGACGATTCAACAACTATTATATATACATAAACAATTAA
TTGTAGACCTTTATATATATAGTGTAATTTTTTGGCGAAAGGGTTCGGATGAACCCCTTG
CATCAACTTGGCTCCATCCTTGTCGATTGTGAGTGTCATTCATTTCTCAGAATTGTATTA
AAATCCTCCCTTTTTTTCTTTAAGAAATTAGAAAGCAAAATCTGCAGGAATTGTATTGAA
ATATGTCTAAATTTTAAGGCTTTGAATTCAATTTCAG