Microarray Probes on PGSC0003DMT400049621
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_37587_PI426222305 |
JHI_St_60k_v1 |
AGACAATACAAGCCGTGTTGTTGGAACATATGGTTACATGTCCCCGGAATATGCAGTCGA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400049621
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400049621 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G27300.1 |
+1 |
1e-141 |
439 |
218/342 (64%) |
S-locus lectin protein kinase family protein | chr4:13669308-13672348 REVERSE LENGTH=815 |
Transcript Sequence (2175 bp)
>PGSC0003DMT400049621 2175 pgsc_dm_v3.4
ATGGAATATGTTAAATTCTTTTTAACAATTTTGAAGAAGAATGCAATGCAACAAAAGGTA
AATATAACTATCATGGATATAACAATATTTCAATTTATTCTACTTCTCTTGTATTTTGTG
TTTCTTCAAAATGTTAGTGGTCAAGGAGATACCATAACTACAACTCAATTCATTAAACAT
GGTGATACTATTGTTTCGTCTCATGGAACGTTCGAGTTAGGATTCTTCAGTCCTGGAGAT
ACTTCTACAAATCACTATGTTGGAATATGGTACAAGAAAACCTCTGCTACTACTCCTGTT
TGGGTTGCCAATAGACTAGCTCCTGTTGCTAATAAGTATGGGGTGTTGAAAGTTATTCAG
CCAGGTCTGATTGTACTTCTGAATGATACTAATGCAACTGTTTGGTCCACAAACTCATCG
AAATCTGTACAGAATCCTGTTGCTCAGTTGTTGGACACAGGGAATTTTGTGGTGAGGGAT
GCTAATGATCCGAATCCAGAGAATTTCCTCTGGCAAAGTTTTGATTATCCTAGTGATACG
TTGTTGGAAGGTATGAAACTTGGGACGGACTTGGTGACTGGATTAGAAAGGTATCTTACT
TCTTGGAGAAGTAGTGATGATCCTGCTCCGGGGGATTATACTTATCATTGTGATCCTACG
GGTTATCCACAAAACCTTATGCGAAAAGGGGCTAATGTGACGTTTAGAGCAGGGCCGTGG
AATGGTATCAGGTGGAGTGGTGCACCAAATCTGGTAAACAACTCTATCATTTCTTTTGGC
ATGGTTATGAATAGTAGGGAAATTTACTACAAGTATGAGATGGTGAACAAATCCGTTATT
TCAACATTTGTTTTAGAGCCTTATGGGAAAGCTATGCGTATCATTTGGATTGGAAAGGTT
CAGGGATGGCTACCTGCATCAGGACAGGATATCTACATTAGGATGTCTGCTTCAGACATA
GGTTCTGCTGGATCAAAAGGAAAGATAGCTTTCATACTTGCAATAGCTTTGCCACTATTG
GTTGCATTGATTCTGCTTGGTTTAGGTGTAGGCCTGATTCTTTGTAAACGAAAAAGGAGA
AAGGATCCGGTGGTTACAACAACAGGGAGATTAGGTGGTCACAGCAACAAGAATGATAAC
AGTAATCAAATTCACGAGGAAAATTTTGAGCTTCCACTTTTTGACTTATTAACGTTAACC
AATGCTACCAACAACTTTTCATTTGCAAACAAGATTGGAGAGGGTGGCTTTGGACAAGTT
TACAAGGGTGTATTAGAAGGTGGACAAGAAGTAGCAGTGAAGCGGCTTTCAGAAACATCA
GAGCAAGGACTTCACGAGTTCAAGAATGAAGTTAAGTGCATCGCAAAACTTCAGCATCGG
AATCTTGTAAAGCTTCTAGGATGCTGCATTCAAGGAGAAGAGAAGATGCTGGTGTATGAG
TACTTGCCAAACAAAAGCCTGGAATTATATATATTTGATGAAGAAAGGAGTGCATTACTT
GATTGGCCTAAGCGCTTCAATATTATCAATGGAATTGCTCGAGGACTGATGTATCTTCAT
CAAGATTCTAGGCTCAGAATCATCCACAGAGACTTGAAAGCTAGCAATGTCTTACTTGAT
ATTGAAATGAATCCAAAAATATCCGATTTTGGGATGGCTAGAAGTTTCAGAGGAGATGAG
ACAGGAGACAATACAAGCCGTGTTGTTGGAACATATGGTTACATGTCCCCGGAATATGCA
GTCGAGGGGATATTCTCAGTGAAATCAGATGTCTTTAGCTTTGGGGTATTAGTACTAGAG
ATTGTGAGTGGAAAGAAGAACCGACGATTTGTTCATCCAGACCACCACTTCAACCTTCTT
GGACATGCATGGATGCTTCATAATGAAGAACGGACGTTGGAACTAGTAGATCCATATCTC
GTAAATTCATACTATATATCAGAAGTACTAAGATCAGTCCATGTGGGATTGTTATGTGTT
CAACAGAATCCAGAGGACAGGCCAAGCATGTCAACTGTGATTATGATGCTGAGCAATGAA
GGCATTTTACCACTGCCTAAACATCCCGGTTTCTTCACTGAAAGGAAAGTTGAAGGTCAT
GATCAATTATCTTGGAGTACACAAACACCAAGTTCTATAAACGAAGTTACCATCACGCTG
TTGAATGCTCGATAG
