Microarray Probes on PGSC0003DMT400049493
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_37588_PI426222305 |
JHI_St_60k_v1 |
CAGCAGATGAAATAGCTTTTCTTGCATGTCATGTAGTTTCACTGTTCCATAGATAATTTC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400049493
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400049493 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G48150.1 |
+2 |
2e-169 |
498 |
242/372 (65%) |
GRAS family transcription factor | chr5:19522497-19524053 REVERSE LENGTH=490 |
Transcript Sequence (2068 bp)
>PGSC0003DMT400049493 2068 pgsc_dm_v3.4
CGTGTATCGTTTGCAGGTTGATATTTTGACAGATACAAGCTGTTAAGTGCGCATACTAGG
AGCGATTTGTGCTTAGAGCAGCTAATGATAGCCATATAGTATGGAATCACACCATCTGTA
TGGATATGGTGGGACTGATGTGAATTTGCCATATTCTTACGCTATGACTACTACTCCTTC
GATACCTAATAGGCTGTTGGGAACATTGAAATTTGATTCGGGAAATTCTCCAAATTCTCC
ATTTGCAAACTATAATGATCCTGGTACCCCTACCACATTAAGTGATAGCCTGGAGCAACA
CAGCTCTACTGAAAATATTTCAGGGACTAGTCCTTGCAGTAATTCCTCGCGGGATTATAA
TCTTTATTTCTGCAGGCCTAGCCCCTCAGCAGATATCCGCCATAACAGTCTTCTGGTTTA
TTCTGGTGATAATTCTTTACTCCAGTATGCAAATCACGGTCACAACATGAAACGTGCACT
GCTTCAATTGGAGACCGCTTTAATGGGGCCAGAAGAAGTCACAACATACAGCCCTTCTGC
AGGGGAAATTCAGCAGCCACAAGCATCAGGTCAGAGGTCCGGGATGTGGCACCAAGATGG
CCAGGTTTCGTATCGAATTGAAACACAGCCATCACATGTTTCTGTCTTTGGCATATCAGG
CAATATAATTCAAAGTGAGAAGCATCACAAACCAATGGTGGATTATCCGTCACAGGGGAT
TCCTTTTGGCAACCTAAAGCAGCTGCTTATCGCGTGTGCCAGAGCTCTTGCTGAGAACAA
CTTGGATGATTTTGAAAAATTGATTGCCAAGGCAAGAAGTGCTGTGTCCATTACTGGTGA
TCCAATCCAGCGTCTCGGTGCTTACATCGTAGAAGGGCTAGTAGCAAGAAAAGAAGCATC
CGGAACCAACATTTACAGGGCTCTCAGGTGTAAGGAACCAGCTGGCAGGGACTTGCTTTC
CTACATGCATATCTTATATGAGATATGCCCTTATCTAAAGTTCGGTTACATGGCTGCGAA
TGGTGCAATAGCAGATGCGTGTAGAAATGAAAATCGCATTCACATTATAGACTTCCAGAT
TGCACAAGGGACTCAATGGATGACTCTTCTTCAAGCTCTTGCTGCCAGGCCTAGCGGTGC
ACCTTATGTACGTATTACAGGTATTGATGATCCAGTTTCAAAATATGCCCGGGGAGATGG
ATTGACGTTAGTGGGAAAAAAGCTGGCAGCCATTTCTGAGAAATTCAACATTCCGGTTGA
GTTTCATGCAGTGCCAGTTTTTGCTCCTGATGTCACCAGGGATATGCTTGATGTGAGGCC
TGGTGAGGCTCTGGCAGTAAACTTCCCTTTGTCACTTCACCACACACCCGATGAGAGCGT
TGATGTTACTAATCCAAGGGATGAGCTTCTAAGGATGGTGAAATCGTTTTCTCCCAAGGT
AGTCACTTTGGTGGAACAAGAATCAAACACAAACACTGCCCCCTTTTTCCCTCGATTTCA
AGAAGCTCTAGACTACTATTCTGCAATGTTCGAGTCCATAGATGTAACGTTAGAAAGGGA
CAAGAAGGAGAGGATCAACGTGGAGCAGCATTGTTTGGCAAGGGATATAGTTAACGTCAT
AGCATGCGAAGGCAAGGAAAGAGCGGAACGCCACGAGCTATTAGGGAAATGGAAATTGAG
GTTCGCAATGGCAGGGTTTCACCAGTATCCTCTGAGCTCTTACGTAAATTCGGTGATAAA
GAGCCTCATGAGGTGCTACTCAGAGAATTATACACTGGTGGAAGAAGATGGAGCTATGTT
GTTGGGATGGAAAAAGAGGTACCTAATCTCTGCATCAGCTTGGCACTGAAAGAAAAAAAG
AAAATTACGAATGGTGGACTAAGCTCCCACTATGTGCGGGATCTAGTGAAGATCTAGTTT
AGCAAATAACAAGTTTATAAGTTCATTAAGTAGAGAAAGCAGCAGATGAAATAGCTTTTC
TTGCATGTCATGTAGTTTCACTGTTCCATAGATAATTTCATGTATCAAAAACTATATTAT
TGTTTATAGACATCTCTTATTATGTTCA
